| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0461 |
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| Symbol | |
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| ID | 5668882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 544538 |
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| End bp | 546100 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641239392 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001504830 |
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| Protein GI | 158312322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAAGA GACGTTTCCT CACCCCCGCC GTCGCCGGCC TGGTGACCCT GGTCTTGGCC
GCCTGTGGTG GCGGCTCCGG CTCCTCCCCG TCCACCCCCG CCACCGGTGA ACCGATACCG
GGAGGCAAGG CAACGGTGCT CATGTTAAGC GACCCGACCA CTCTGGACCC GGCCCGTCTC
GGCAATGCCT ATGCGATCAC TCCTGTCCTG GGGAATGCCC TGTACGGGAC GTTACTGACC
GACGACAAGA AGACCGGCGA GATCCAGTAC TCGCTGATCG AGTCATTCGA GACAACCGAC
CAGGGCGCCA CATTCACCCT CAAGCTGCGT CCGGACCTGG TGTTCTCTGA TAGCACCCCC
TTCGACGCCG AGGCCGTCAA GTTCAACTGG GACAGGATGA GAGACCCTGC CACCGGTTCG
ACCTCCATCG CGGAGGCATC GATGATTAAG GCCATCAAGG TGGTGGACGA CGTCGTTCTT
GAGGTCACCA TGGCCACCCC GGTACCCAGC TACGCCTATT CGATCTTGAC CAGCTCCATG
AACTGGGTCG CCTCACCCAC GGCCCTACGC AAGGGGGCGG AGGCCTTCAA CGAGAACCCG
ATCGGCGCCG GACCGTTCAC CCTGCAGCGT TGGAACAGGC AGGCCACCAT CGAACTGATC
AAGAATCCCC GCTACTGGGA CGCCCCCAAG CCCTACCTCG ACGGGCTCAC GCTGCGCGCG
GCCACCGACT CCGGCCAACG GCTCAACACC GTGGTCTCCG GTGGCGCGGA CGTGGCCGTC
GACTCGAACT GGCTCAACAT CGCCAAGGCC CGGGAGCAGG GCCTGACCGT CGACCTGCAG
GAACTCAACG GCGGCATCCT CATCGCCCTG AACATGCGCC GAGCCCCCTT CGACGACATC
CGCGCTCGCC GCGCCGTCTC CGCCGCCCTC GACCTCGATG CACTCAACCT CGCCGTCTAC
AGCGGCGAGG GGAAGATGGT CGACACCCTG TTCACCAAGG GCTCGTTATT CTATTCCGAC
ACTCCCCTGC GCAAGCACGA CAAGGAAACC GCGCAACGGC TCTTCGACGA GCTGGCCGCG
GACGGTAAGC CGGTGTCATT CACCTTTTCC GCCTACCCCA CCACCGAGAA CCGGACGACG
GCCGAGAACA TCCAGGCCCA GCTCGGCGCC TTCCGGAACG TCAAGGTCGA AATCGCGACC
GTCGATTTCT CCCAGCTCGC CAAAGTGCGG TCGCAGCACG ACTTCGACAT GATCGTCTCC
GGCGGGTTCT TCCGTGATCC CGAGCCCGGG CTGTGGACGG CGTTCCACAG CAGCTCGGTG
GCCAACCAGA CCGGCGTCGA CGATCCGACG CTCAATGAGG CGCTGCTGGC CGGACGGACG
GAGATCACCC AGGAGGCCCG CGAGAAGGCC TACGCCACCG TCCAGCAGCA GCTAACCGAT
CTGGTCCCGG TGATCTACCT CGCGCGGGTG GCACCCAGCG CGATTGCGAA CACGAACGTC
GGCGGTGTCA TCCAATACGG CAACGGTTCC CTGCGACCAG AGGAGCTGTG GATCAAGAAG
TAG
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| Protein sequence | MRKRRFLTPA VAGLVTLVLA ACGGGSGSSP STPATGEPIP GGKATVLMLS DPTTLDPARL
GNAYAITPVL GNALYGTLLT DDKKTGEIQY SLIESFETTD QGATFTLKLR PDLVFSDSTP
FDAEAVKFNW DRMRDPATGS TSIAEASMIK AIKVVDDVVL EVTMATPVPS YAYSILTSSM
NWVASPTALR KGAEAFNENP IGAGPFTLQR WNRQATIELI KNPRYWDAPK PYLDGLTLRA
ATDSGQRLNT VVSGGADVAV DSNWLNIAKA REQGLTVDLQ ELNGGILIAL NMRRAPFDDI
RARRAVSAAL DLDALNLAVY SGEGKMVDTL FTKGSLFYSD TPLRKHDKET AQRLFDELAA
DGKPVSFTFS AYPTTENRTT AENIQAQLGA FRNVKVEIAT VDFSQLAKVR SQHDFDMIVS
GGFFRDPEPG LWTAFHSSSV ANQTGVDDPT LNEALLAGRT EITQEAREKA YATVQQQLTD
LVPVIYLARV APSAIANTNV GGVIQYGNGS LRPEELWIKK
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