Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0450 |
Symbol | |
ID | 5668872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 530652 |
End bp | 531593 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641239382 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001504820 |
Protein GI | 158312312 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTAGCCT ATGTACTCCG GCGGCTCGGC GCAGGTGTGG TGCTCGCTCT CCTCGTCACA TTGATCACGT TCTTCCTGCT GAGCCTTTCG TTCGACAGCG TGGTCAGGAG CCTCCTTGGC CCCAGCGCGA CGCCCGAGAC GCTGCATGCA CGCAAAGCTC AGATGGGGCT CGATCGGCCG GTCTTGGTCC AGTATCTCGA CTGGCTGGCC CACGCAGCGC GAGGCGACCT CGGCGTCTCG TACTTCACCA GCGAGCCGGT CGTCCAGGCC GTGCCGACGC GGCTGGGCGT CACCCTGTCC GTCATCGTCG TCGCACTGAT CCTCACGGCC CTCATCAGTG TCATGCTCGG TGTGCTGGCG GCCAGCCGTG GTGGTGTCGT CGACCGCGTA GCCCAGGGAG CCTCGCTCGT CGGCCAGCTC GTACCTCACA TGCTGATCGC GATCATCCTG GTCACCGTGC TCGCCATCAA CCTGAAGCTG CTCCCCCCCA CCGGTTTCAC GCATCTCACC GACGACCCGG GCCGCTGGGC GGCCACCATC ACCATTCCGG TGATCACCCT GACGGTGGCC AGTATCGCCA ATGCGACGGC GCAGGTCCGC GGCGCCATGG TCGACGAGCT GAGCAAGGAC TACATCCGCA CCCTACGTAC CCGCGGAATC TCGTCCCGGT CAATCCTGCT ACGCCACGCG CTACGAAACG CGGCGGGTCC CGCGCTCACC GTGCTGTCCC TGGAATTCAT CACGATGTTC GGCGGCGTTC TCATCCTCGA GAACATCTTC GCCCTGCCGG GCTTCGGAAC CTATGCGTTC AACGCCTCCC TGCAGGGCGA CGTCCCGATC ATCATGGGAG TCACCCTGTT CGCGGTGCTG CTCATCGTCA CCGTCAACCT CGTCGTCGAC CTCGTGAACG GATGGCTCAA CCCGAAGGCG AGAATCCATT GA
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Protein sequence | MLAYVLRRLG AGVVLALLVT LITFFLLSLS FDSVVRSLLG PSATPETLHA RKAQMGLDRP VLVQYLDWLA HAARGDLGVS YFTSEPVVQA VPTRLGVTLS VIVVALILTA LISVMLGVLA ASRGGVVDRV AQGASLVGQL VPHMLIAIIL VTVLAINLKL LPPTGFTHLT DDPGRWAATI TIPVITLTVA SIANATAQVR GAMVDELSKD YIRTLRTRGI SSRSILLRHA LRNAAGPALT VLSLEFITMF GGVLILENIF ALPGFGTYAF NASLQGDVPI IMGVTLFAVL LIVTVNLVVD LVNGWLNPKA RIH
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