| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0344 |
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| Symbol | |
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| ID | 5668768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 412898 |
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| End bp | 413734 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239276 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504716 |
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| Protein GI | 158312208 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0130127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG TGGGCATCGT GACGGGGGCC GGCCGCGGCA TGGGTCTGGC CTGCGCCCAC
CGGCTCGTCG ACCTGGTGGA CGTCCTGCTC CTGGTGGACC GCGACCCCGC CGTCGCCGGA
GTGGTCGGCG AGCTCACCAA GGCCGGTTCG GCCACCGTCG AGCCGTTCGT CCTGGACATC
ACCGACGTCG ACGGCGTGGA GCGGCTCGCC GCCCGGGTCG CCGAGCTCGG CACGCTGCGC
GCCGTCGCCC ACGCGGCCGG GATCTCCCCG ACCATGGCCG ACTGGCGGCG CATCTTCGCC
GTCGACCTGG TCGCCACGGC GCAGCTGGCG CAGGCGCTGC GGCCGCTCAC CACGGCCGGC
ACGGCGTCGG TCTACTTCGC CTCGATGGCG CCGATCCTGG CGATCGGTGA ACCCCACCCG
ACCGCCGACG CCGCGCTGGA CGACCCGCTC GCCCCGGACC TCCTCGACCG GATCCACGCC
GCGCTCGGCG CCACGGTCGA GGACTCGGGC TGGGCCTACT CGTGGGCCAA ACGGGGGGTG
CAGCGCTTCG CCCAGCAGGA GGCCGTCCGG GTCGGGCCGC TCGGCGGCCG GGTCTGCTCC
CTCTCCCCGG GGATCATCGA CACGCCGCAG GGCAAGCAGG AGGCGGCGGA GCACAGCTCC
ATGCAGGCGC TCGTCGAGCG GACCCCGGTC GGCCGCATCG GGCAGTCCGA GGACGTCGCC
GACGTGGTCG CCTTCCTCCT GTCGGACCAG GCGCGCTTCG TCAGCGGCAT CGACGTCCTC
GTGGACGGCG GGGTCGCGGC GGCCGTGCGC GGGCCTGCCG CCGCTGCCGT GAGGTAG
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| Protein sequence | MSTVGIVTGA GRGMGLACAH RLVDLVDVLL LVDRDPAVAG VVGELTKAGS ATVEPFVLDI
TDVDGVERLA ARVAELGTLR AVAHAAGISP TMADWRRIFA VDLVATAQLA QALRPLTTAG
TASVYFASMA PILAIGEPHP TADAALDDPL APDLLDRIHA ALGATVEDSG WAYSWAKRGV
QRFAQQEAVR VGPLGGRVCS LSPGIIDTPQ GKQEAAEHSS MQALVERTPV GRIGQSEDVA
DVVAFLLSDQ ARFVSGIDVL VDGGVAAAVR GPAAAAVR
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