Gene Franean1_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0243 
Symbol 
ID5668668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp297807 
End bp298133 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content64% 
IMG OID641239173 
Productpeptidylprolyl isomerase 
Protein accessionYP_001504616 
Protein GI158312108 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0565946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.433333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTTT CGATTGAAAC CCTCTCGCAG GGAGACGGCA AGACTTTCCC CAAGAAGGGG 
GACCGGGTGA CGATTCACTA TGTCGGCACC CTGCGTGACG GCCGGCAGTT CGACTCGTCC
CGTGACCGGG GCGCGCCGTT CGTCACCGAG ATCGGTGTCG GCAGGGTCAT CAAGGGATGG
GACGAGGGGG TTCCCCAGCT TTCCCTCGGT GAGAAGGCCG TGCTCACCAT CACGCCCGAC
TACGGGTACG GCCCCGGTGG TTTCCCGCCC GTCATTCCGC CGAACTCCGA CCTTTTCTTC
GAGGTGGAGC TCCTCGCCAT CAACTGA
 
Protein sequence
MGVSIETLSQ GDGKTFPKKG DRVTIHYVGT LRDGRQFDSS RDRGAPFVTE IGVGRVIKGW 
DEGVPQLSLG EKAVLTITPD YGYGPGGFPP VIPPNSDLFF EVELLAIN