Gene Franean1_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0181 
Symbol 
ID5668606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp219531 
End bp220196 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content77% 
IMG OID641239110 
Producthypothetical protein 
Protein accessionYP_001504554 
Protein GI158312046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.198242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.505027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCG CCCATGCCGA GGCCCGGCGC CGAAGTGTCC CGGGCCCGAC CTCGTCGCCG 
CGCCCGGGGC GGAGCGGCTC CGCGGACACG GGCCCCGGCG GCCGAACCGG CCACACCGGC
CCAGGCGGCT CCGGCCCCGC CGGCACCAGG CCCGCGGGTT CCGGGCCTGC GAACTCCAGG
CCCACCAACG CCGGACCCGT AGATCACGGG CCCACCGGCT CCAGGCCCGC GGATCCAGGG
CCCGCAGGTT CCAGGCCCGC AGGTTCCAGG CCAACCGGCT CAGGGCCGGA GAACTCCGGG
CCCAGCCAGG CGGCGGCAGG CGGCGCGGCG GGCGGGAGCG CGACCGGCGG CGGCGAGGGT
GGCTCCGGTG AGAACGGGCG CGGCGCCAAC GGGCTGACGG AACGGGAAGC CCGGGTCCTC
GCCTTCGAAA GCCAGTGGTG GCGCTATCCC GGCGCCAAGG AGGCCGCCAT CCGGGCGGAG
TTCGGCCTGT CGTCAACCCG TTACTACCAG ATCCTGAACG TTCTGATCGA CTCGCCGGCC
GCGCTGGCCG CCGACCCGAT GCTCGTCCGC CGACTGCGGC GGCTGCGCGA GCAACGCCGG
CGCGCCCGCG CCGGTCATGT GGACGACGCC GGTGAGCCCG GCGACGACGG TTCCGACGAC
GCCTGA
 
Protein sequence
MDAAHAEARR RSVPGPTSSP RPGRSGSADT GPGGRTGHTG PGGSGPAGTR PAGSGPANSR 
PTNAGPVDHG PTGSRPADPG PAGSRPAGSR PTGSGPENSG PSQAAAGGAA GGSATGGGEG
GSGENGRGAN GLTEREARVL AFESQWWRYP GAKEAAIRAE FGLSSTRYYQ ILNVLIDSPA
ALAADPMLVR RLRRLREQRR RARAGHVDDA GEPGDDGSDD A