Gene Franean1_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0180 
Symbol 
ID5668605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp218865 
End bp219521 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID641239109 
Producthypothetical protein 
Protein accessionYP_001504553 
Protein GI158312045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.323163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.508891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGAG GCTCCCACGA CTTCTCCCGG CACCCGGGTG GTGACCGCCT GCGCATGGCA 
GGTGCCGCCC TGGTGGCCGT GCTGGCCGTA CTGGCCGGAA TTCTGCTGGT GAACCTGTTC
AACGGGTCCG GCGACTCTGA CGACGGCGCC GCCCCGGCGG TGACCGGCGA GCCCGCCGCC
CCCTCGGGCG AGCCGGCGCA GGGCGTAGAC CGCCCCGAGG ACTCCTCCAG CCCGACGCCG
TCGGAGCGGG CGACCCCGAG CCGGTCGCCC AGCCCGACAC CCGGCCCGCG GCCGTCGCCG
ACGCCGCAAT CCGCCCCGGC GCAGCCACCC GCGGCCCCGG GCACCGGGGC GCCGAAGGTC
TTCGCGCCCG TCGTCGTGCT GAACAACTCC CGGATCGCGG GTCTCGCGGA CAGCGCCGCC
AACCGGGTGG AGGCGGCCGG CTTCCGGGTC GAACGGGTCG GCAACTACCT GGGCCAGTAC
AACGTGCCGG TTTCGACCGT CTTCTACGAT CCCGAGGACG CCGACGCCGC GCGCACCCTG
CTCGAGACGG TTCCCGGCGT CGAGCGCATG GTGCCCCGCG CAGAAACGAG GATCATCGAG
ACCGACACCC TGATCCTGGT CGTCACCCGT GACTTCCCGA CCGACGACCA GCCCTGA
 
Protein sequence
MPRGSHDFSR HPGGDRLRMA GAALVAVLAV LAGILLVNLF NGSGDSDDGA APAVTGEPAA 
PSGEPAQGVD RPEDSSSPTP SERATPSRSP SPTPGPRPSP TPQSAPAQPP AAPGTGAPKV
FAPVVVLNNS RIAGLADSAA NRVEAAGFRV ERVGNYLGQY NVPVSTVFYD PEDADAARTL
LETVPGVERM VPRAETRIIE TDTLILVVTR DFPTDDQP