| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0104 |
|---|
| Symbol | |
|---|
| ID | 5668529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 123040 |
|---|
| End bp | 123750 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001504477 |
|---|
| Protein GI | 158311969 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAC CACCGTCGCT GCCGGCCCAG CTCTACCTGC TGGCCTACGA CCTGGAGCGG
AACCGCATGT ACCGCTCGCC CTATCTGGGT CGCGCGCTAC GCGCGGCCGC CGCGACCGAG
CTCTACCGGG CTGGACTGCT GACCGACGAG AACGGCCGGG TCAAGCCCGT CGCGCCCCGT
GCGGAGCACC GGCCGCACGC GGAAGGGCGG CCGGGCCAGC CTGCTGCGCC GGGCCGGCGG
CGCACCCCGA CCGCCGATGA GCTGTGCGCA CAGCTCATCA GCGAGGTCGG CGCGTCGTCC
CGTCACCGGT CGTGGAAGCA CTGGGTGAAC AAAAACCAGC GGACCGCCGG CCGGGTCGTG
CGCGACCAGC TCGAGGCGGG CCGCTGGATC AGGGTCGAGC GACGCCGGAT CCTGGGGATG
ATCCCGGCGA CCTCCGTGAC CGTGCGGGAC CGGGCGATGG TCCGCCGGCT GCACCGCGAG
GTGGAGCAGG TCCTACACGG AGGCCCGGCC GGCCGCGCCG ACCCCGGCCC GGCGAGCCTG
GCCGCGCTCC TCGCCGCCGG TCAGATCGGG GCGATGAAAA GCGGCCGGGC CCGGCGGGCA
CTCAAGGGTC GGCTCGCGCT GCTGGAACCG GTCGCCGGGC CGGCCGTCCC GGCGCTGCGC
GCCGCCGTGC GGGAGGCGCA GACCGCCGAA TCAGCCGGTG CAGCCGGTTG A
|
|---|
| Protein sequence | MQPPPSLPAQ LYLLAYDLER NRMYRSPYLG RALRAAAATE LYRAGLLTDE NGRVKPVAPR
AEHRPHAEGR PGQPAAPGRR RTPTADELCA QLISEVGASS RHRSWKHWVN KNQRTAGRVV
RDQLEAGRWI RVERRRILGM IPATSVTVRD RAMVRRLHRE VEQVLHGGPA GRADPGPASL
AALLAAGQIG AMKSGRARRA LKGRLALLEP VAGPAVPALR AAVREAQTAE SAGAAG
|
|---|
| |