Gene Franean1_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0024 
Symbol 
ID5668451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp29898 
End bp30662 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content77% 
IMG OID641238953 
Productmycothiol-dependent maleylpyruvate isomerase 
Protein accessionYP_001504399 
Protein GI158311891 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCGGT TGGCGGCGCC GAGCCCGCTG CCGGGACCGG AGTACACACC GTCCGCCGTG 
CCGCTCGACA TCCTGCTGGG CTGCGCGCGG TCGCACGCCA GGCTGCTCGA AGCCGTCGCC
CGCGTCGACG ACACGACCGC CCGCCGCCCG TCCCTGCTGC CCGGCTGGAC CGTCGGCCAC
CTCGTCACCC ACCTGGCGAG GAACGCCGAC AGCCACACCG GGATGTTCGG GGCGGCCGCC
GAAGGACGGG TCGTGGCGCA GTACCCGGGC GGCCTGACGC AGCGCGACGG CGGCATCGAG
GCGGGCGCCC ACCAGCCGGC CGACCTGCTG CTCGCCGACC TTGCCGGCGC GGTGGCCCGG
CTCGAACGAG CCTGGGACGG CACCCACGTC GACGTCTGGC GCGGGGGCCT GGGGCTGACC
GCGGCGCGCG GCGCGACGAG TGTGGCGGAC CTGGTGTTCC TGCGGTGGCG TGAGGCCGAG
ATCCACCTCG TCGACCTCGC GCTGACCGAT CGCGGCGGCC CGGAGTGGGA CGACCTCAGC
CCCGCCTACG TCGAGGCGGA GTGGGCGTGG AGCACGCGGC TGCTGCCCGA ACGGCTGCCC
GCCGAGGTCA CCGTCCTGCT GACCCCCGGG GACCGGCCGT CGCGCGCCGT GGGGCGGGGC
CCGCAAGTCG TCCGGGTGGA CGTCCCGACG CTGCCGGCGT TGCGCTGGCT GACCGGCCGG
GACGCCGGCG ATCCGGCCTG GCCGCCGCTG GGCCCCTGGA CCTGA
 
Protein sequence
MRRLAAPSPL PGPEYTPSAV PLDILLGCAR SHARLLEAVA RVDDTTARRP SLLPGWTVGH 
LVTHLARNAD SHTGMFGAAA EGRVVAQYPG GLTQRDGGIE AGAHQPADLL LADLAGAVAR
LERAWDGTHV DVWRGGLGLT AARGATSVAD LVFLRWREAE IHLVDLALTD RGGPEWDDLS
PAYVEAEWAW STRLLPERLP AEVTVLLTPG DRPSRAVGRG PQVVRVDVPT LPALRWLTGR
DAGDPAWPPL GPWT