| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_R0039 |
|---|
| Symbol | |
|---|
| ID | 3903890 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3748112 |
|---|
| End bp | 3751216 |
|---|
| Gene Length | 3105 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640712487 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0522575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.211989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GGCCAAGTTA TTAAGGGCGC ACGGTGGATG CCTTGGCACC AGGAGCCGAT GAAGGACGTG
GGAGGCTGCG ATATGCCTCG GGGAGCTGTC AACCGAGCTG TGATCCGAGG ATTTCCGAAT
GGGGAAACCC GGCAGGGCTT TAAATCCTGT CACCCGTGCC TGAACACATA GGGCATGTGG
AGGGAACGCG GGGAAGTGAA ACATCTCATT ACCCGCAGGA GGAGAAAACA ACCGTGATTC
CGCGAGTAGT GGTGAGCGAA AGCGGAACAG GCTAAACCAG TGTCGTGTGA GAGCCGGCAG
GTGTTGCGAT GCTGGGGTTG TGGGATCGTC CAGGTGGAGC TGCCGTTCCA TCGGGGAGTC
AGAAAGAGCA TTGTTAGGCG AAGGTCATGC GAATGGGCCG CCATAGAGGG TAATAGCCCT
GTAGCCGAAA GCAGTGTTCC TCCCGGACGT GTTCCCAAGT AGCACGGAGC CCGTGTAATT
CCGTGTGAAT CTGGCGGGAC CACCCGCTAA GCCTAAATAC TCCCTGGTGA CCGATAGCGG
ACTAGTACCG TGAGGGAAAG GTGAAAAGTA CCCCGGGAGG GGAGTGAAAT AGTACCTGAA
ACCGTGTGCC TACAATCCGT GGGAGCTGGA CTGTGGTCTG GTGACCGCGT GCCTTTTGAA
GAATGAGCCT GCGAGTTTGC GGTGTGTGGC GAGGTTAACC CGTGTGGGGT AGCCGTAGCG
AAAGCGAGTC CGAAGAGGGC GTTGAGTCGC ATGTCCAAGA CCCGAAGCCG AGTGATCTAC
CCATGGCCAG GTTGAAGCGC GGGTAAGACC GTGTGGAGGA CCGAACCCAC CAGGGTTGAA
AACCTGGGGG ATGAGCTGTG GGTAGGGGTG AAAGGCCAAT CAAACTCGGT GATAGCTGGT
TCTCCCCGAA ATGCATTTAG GTGCAGCGTC GTATGTTTCT TGCCGGAGGT AGAGCACTGG
ATGGCCTAGG GGGCCCACAA GCTTACTGAA GTCAGCCAAA CTCCGAATGC CGGTAAGTGA
AGTGCGGCAG TGAGACTGCG GGGGATAAGC TTCGTAGTCG AGAGGGAAAC AGCCCAGATC
GCCAGCTAAG GCCCCTAAGC GTGCGCTAAG TGGAAAAGGA TGTGGAGTCG CATAGACAAC
CAGGAGGTTG GCTTAGAAGC AGCCACCCTT GAAAGAGTGC GTAATAGCTC ACTGGTCAAG
TGATTCCGCG CCGACAATGT AGCGGGGCTC AAGCGCACCG CCGAAGCTGC GGCATGCACA
AAATTTCCCG GCACTTTGGT GTCCAGGTTT GTGTGTGGGT AGGGGAGCGT CGTGTGGCGT
GTGAAGCGGC GGGGTGACCC AGCCGTGGAT GCCATACGAG TGAGAATGCA GGCATGAGTA
GCGAATGACG GGTGAGAAAC CCGTCCGCCG GATGACCAAG GGTTCCTGGG GCAGGCTAAT
CCGCCCAGGG TGAGTCGGGA CCTAAGGCGA GGCCGACAGG CGTAGTCGAT GGATAACGGG
TTGATATTCC CGTACCGGCG TTGACGCGGC CATGCTGAAC CTGGTTTGTG CTAACCATCT
GATCGGATGT GTCTCTTCGG AGGTGTGTTC GGGAGGGTGG GATCCCGGCT GGTAGTAGGC
AAGCGATGGG GTGACGCAGG AAGGTAGTCC AGCCCAGGCG GTGGTTGTCC TGGGGCAAGG
GTGTAGGACG AGGCGTAGGT AAATCCGCGT CTTGTGTGTC TGAGACCTGA TGCCGAGCCG
ATTGCGGCGA AGTGGGTGAT CCTATGCTGC CGAGAAAAGC CTCTAGCGAG TGTCAGGGCC
GCCCGTACCC TAAACCGACA CAGGTGGTCA GGTAGAGAAT ACCGAGGCGT TCGAGTGAAC
TGTGGTTAAG GAACTCGGCA AAATGCCCCC GTAACTTCGG GAGAAGGGGG GCCGTTCTCC
GTGTAGGGGT TTACCTCCGA AGCGGGGAGT GGCCGCAGAG ACCAGGGGAA AGCGACTGTT
TACTAAAAAC ACAGCTCCGT GCTAAGTCGT AAGACGATGT ATACGGAGTG ACGCCTGCCC
GGTGCTGGAA CGTTAAGGGG ACGGGTTAGC TCTTCGGGGC GAAGCTCAGA ACTTAAGCGC
CAGTAAACGG CGGTGGTAAC TATAACCATC CTAAGGTAGC GAAATTCCTT GTCGGGTAAG
TTCCGACCTG CACGAATGGC GTAACGACTT TCCCACTGTC TCAACCACAG ACTCGGCGAA
ATTGCATTAC GAGTAAAGAT GCTCGTTACG CGCGGCAGGA CGGAAAGACC CCGGGACCTT
TACTATAGCT TGATATTGGT GTTCGGTTCG GCTTGTGTAG GATAGGTGGG AGACTGTGAA
GCTGGGACGC CAGTTCTGGT GGAGTTGTTG TTGAAATACC ACTCTGGTCG TACTGGATGT
CTAACCTGGG TCCGTGATCC GGATCAGGGA CAGTGTCAGG TGGGTAGTTT AACTGGGGCG
GTTGCCTCCT AAAGGGTAAC GGAGGCGCCC AAAGGTTCCC TCAGCCTGGT TGGCAATCAG
GTGTTGAGTG CAAGTGCACA AGGGAGCTTG ACTGTGAGAC AGACATGTCG AGCAGGTGCG
AAAGCAGGGA CTAGTGATCC GGCGGTGGCT TGTGGAAGCG CCGTCGCTCA ACGGATAAAA
GGTACCCCGG GGATAACAGG CTGATCTTGC CCAAGAGTCC ATATCGACGG CAAGGTTTGG
CACCTCGATG TCGGCTCGTC GCATCCTGGG GCTGGAGTAG GTCCCAAGGG TTGGGCTGTT
CGCCCATTAA AGCGGTACGC GAGCTGGGTT TAGAACGTCG TGAGACAGTT CGGTCCCTAT
CCGCCGCGCG CGCAGGAGAC TTGAGAAGGG CTGTCCCTAG TACGAGAGGA CCGGGACGGA
CGAACCTCTG GTGTGCCAGT TGTTCTGCCA AGGGCATGGC TGGTTGGCTA CGTTCGGAAG
GGATAACCGC TGAAAGCATC TAAGCGGGAA GCCTGCTTCG AGATGAGGTC TCCCACAGGG
TAGCCTGGTA AGGCCCCCGA CTAGATGATC GGGTTGATAG GCCGGAGGTG GAAGTGCGGT
GACGCATGGA GCTGACCGGT ACTAATAGGC CGAGGGCTTG TCTTC
|
|---|
| Protein sequence | |
|---|
| |