| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4473 |
|---|
| Symbol | |
|---|
| ID | 3907449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5343752 |
|---|
| End bp | 5344831 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637881805 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_483548 |
|---|
| Protein GI | 86743148 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCGC TGAATGGTGG ATCCGGAGAA CCGTCGGGTG ACTTGGCGGG ACGGCCGGCG
CTGACCGCGC AGGACTACAT GACCGGCAAC GAGGTCCGCT GGTGCCCCGG CTGCGGGGAC
CACGCCATCC TCTCGACGAT GCGGGGTCTG CTGCCGGCCC TCGGCGTCCC GCCCGAGAAC
ATCGTGATCG TGTCCGGCAT CGGGTGCTCC TCGCGGTTCC CCTACTACCT CGACACCTAC
GGCATCCACT CGATCCACGG CCGGGCGCCG TCCTTCGCGA CCGGTGTCTC GATCAACCGG
CCGGACCTGG CGGTGTGGGT CGTAACCGGT GACGGCGACG CGCTGTCGAT CGGCGGTAAC
CACCTTATTC ACGCGCTGCG TCGCAACGTG AATCTCAAGA TCATGTTGTT CAACAACCAG
ATCTACGGTT TGACGAAGGG TCAGCATTCG CCGACCTCCA GGATCGGCAC GATCAGCCCG
TCGAGCCCCC ACGGGTCGCT CGACAACCCG TTCGACCCGG TTGCGCTCGC GCTCGGCGCC
GGCGCGACGT TCGTCGCCCG CACGATCGAC TCGGACCGTC GCCACCTCAC CGCCACCCTC
ACCGCCGCCG CGGCGCATCA GGGAGCGGCG CTGGTGGAGA TCCGGCAGGG CTGCCCCACG
TTCAACGCGA TCCCCCGTCA GCCGAAGCGG TCCGATGCCG ATGCCGATGC CGGCGCCGCC
GGGGCGAAGG GCGAGCAGGG GCCGATCCGG CTCTCGCCCG GTATGCCGGT GGTTTTCGGC
GTGGACGAGC AGTACGCCGT GATCCGCGAC CCGGCCACCG GGGAGCTGGC GGTCGGGCAC
AGCGGTGACC CCCGCGTCGT GGTGCACGAT CCGACGGTGG AGAACTCGAC CTATGCCTAC
GCCCTGGCCC AGTTGGCGCA GGCGGAGTTT CCGGAGCCGC CGATCGGCGT CTACCGGTCG
GTCTCGCATC CCGTGTTCGA CCAGCTGTTC CAGGAGCGGC TGGCGACCGC CCGGCCCGGC
GGCCTGGGCG ATCTGCGGAC GTTGCTCCAG GGCGCCGACT CCTGGACGGT GGCCGGGTAG
|
|---|
| Protein sequence | MISLNGGSGE PSGDLAGRPA LTAQDYMTGN EVRWCPGCGD HAILSTMRGL LPALGVPPEN
IVIVSGIGCS SRFPYYLDTY GIHSIHGRAP SFATGVSINR PDLAVWVVTG DGDALSIGGN
HLIHALRRNV NLKIMLFNNQ IYGLTKGQHS PTSRIGTISP SSPHGSLDNP FDPVALALGA
GATFVARTID SDRRHLTATL TAAAAHQGAA LVEIRQGCPT FNAIPRQPKR SDADADAGAA
GAKGEQGPIR LSPGMPVVFG VDEQYAVIRD PATGELAVGH SGDPRVVVHD PTVENSTYAY
ALAQLAQAEF PEPPIGVYRS VSHPVFDQLF QERLATARPG GLGDLRTLLQ GADSWTVAG
|
|---|
| |