Gene Francci3_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4426 
Symbol 
ID3907401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5292779 
End bp5293174 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content71% 
IMG OID637881757 
Productcold-shock DNA-binding protein family protein 
Protein accessionYP_483501 
Protein GI86743101 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.285968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG GCAAAGTCAA GTGGTTCGAC GTCGACAAGG GCTTCGGCTT TCTCAGCCGG 
GACGACGGCG GCGACGTCTT CGTGCACAAG GCCGCCCTGC CCGCCGGGGT CGACCGGCTG
AAACCCGGCG ACCGGGTCGA GTTCGGCGTC GCCGCCGGGC GGCGTGGCGA CCAGGCACTG
TCGGTCCGGC TGCTGACCGC CCCGCCGTCG GTCGCCAAGG CGGCCGCCCA GGCCGCGCGG
CGCAGTCCGG ACGAGCTGCA CAGCATGGTC GAAGACATGA TCAAGGTGCT GGACGACGTG
CAGCGGGACC TTCGTCGCGG CCGGTATCCC GACCGGCGGA CCGCCCAGCG GGTCGCCAAG
GTCGTGCACG CCGTAGCCAA CGAGTTGGAG GTCTAG
 
Protein sequence
MPTGKVKWFD VDKGFGFLSR DDGGDVFVHK AALPAGVDRL KPGDRVEFGV AAGRRGDQAL 
SVRLLTAPPS VAKAAAQAAR RSPDELHSMV EDMIKVLDDV QRDLRRGRYP DRRTAQRVAK
VVHAVANELE V