Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4363 |
Symbol | |
ID | 3907335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5211144 |
End bp | 5211839 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881694 |
Product | putative integral membrane protein |
Protein accession | YP_483438 |
Protein GI | 86743038 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0242225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGA CGTCGCCGGC GCGGTGCGGA TCCGCGCGAT GTGGTCCCCG CCGACTTGGT CGGCGGGTGC CGACCAGGGG CCGGCACACT GGTCGAGTGG ACGTCGGCAG CCTGTCCGGG ATGACGCTGT ACGTCGTCCT CTTCGCGGTC ATCTTCGTCG AGAGCGGGAT CCTGATCGGG TTCTGGCTTC CGGGTGACAC CATTCTCTTC GCGGCCGGGC TGATGGCGGC GGACGCGGCG TCGAACGTGT CCGTCGCGGT CCTCTCGATC GGGGTCGCGG CGGCAGCCAC CGTCGGGGCG GCGGCGGGCT ACTACACCGG GCATCGTCTC GGCCGGCCGT ACCTGGAACG CAGGCACGCC ACGGTGCTGG CCCGTACGGA GGAATTCTAC CGGCGGTTCG GGCCGATCAC CCTGGTCGCG GCCCGCTTCG TGCCGTGGGC GAGGACGTTC GCGCCGGTAC TCGCCGGGAC CGTGGCGATG TCATGGTCCC GCTTTCTGAT CGCGGTCGTG CTCGGGGCGC TCGTCTGGGG GACCGGATTG ATCCTTCTGG GCTATACGGC GGCCGCCATT CCTGGGCTGC GGGACGCGGC GGTGTGGATC GCGCTCGTAG TGATCGTCAT CTCCGTCATC GCCGGGATCG CCGGCGAGCT GCTGCGCCGG CGATCGGGCC GGCTCCCCGA CCAGGGGCCG CGGTAG
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Protein sequence | MRLTSPARCG SARCGPRRLG RRVPTRGRHT GRVDVGSLSG MTLYVVLFAV IFVESGILIG FWLPGDTILF AAGLMAADAA SNVSVAVLSI GVAAAATVGA AAGYYTGHRL GRPYLERRHA TVLARTEEFY RRFGPITLVA ARFVPWARTF APVLAGTVAM SWSRFLIAVV LGALVWGTGL ILLGYTAAAI PGLRDAAVWI ALVVIVISVI AGIAGELLRR RSGRLPDQGP R
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