Gene Francci3_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4363 
Symbol 
ID3907335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5211144 
End bp5211839 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID637881694 
Productputative integral membrane protein 
Protein accessionYP_483438 
Protein GI86743038 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0242225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA CGTCGCCGGC GCGGTGCGGA TCCGCGCGAT GTGGTCCCCG CCGACTTGGT 
CGGCGGGTGC CGACCAGGGG CCGGCACACT GGTCGAGTGG ACGTCGGCAG CCTGTCCGGG
ATGACGCTGT ACGTCGTCCT CTTCGCGGTC ATCTTCGTCG AGAGCGGGAT CCTGATCGGG
TTCTGGCTTC CGGGTGACAC CATTCTCTTC GCGGCCGGGC TGATGGCGGC GGACGCGGCG
TCGAACGTGT CCGTCGCGGT CCTCTCGATC GGGGTCGCGG CGGCAGCCAC CGTCGGGGCG
GCGGCGGGCT ACTACACCGG GCATCGTCTC GGCCGGCCGT ACCTGGAACG CAGGCACGCC
ACGGTGCTGG CCCGTACGGA GGAATTCTAC CGGCGGTTCG GGCCGATCAC CCTGGTCGCG
GCCCGCTTCG TGCCGTGGGC GAGGACGTTC GCGCCGGTAC TCGCCGGGAC CGTGGCGATG
TCATGGTCCC GCTTTCTGAT CGCGGTCGTG CTCGGGGCGC TCGTCTGGGG GACCGGATTG
ATCCTTCTGG GCTATACGGC GGCCGCCATT CCTGGGCTGC GGGACGCGGC GGTGTGGATC
GCGCTCGTAG TGATCGTCAT CTCCGTCATC GCCGGGATCG CCGGCGAGCT GCTGCGCCGG
CGATCGGGCC GGCTCCCCGA CCAGGGGCCG CGGTAG
 
Protein sequence
MRLTSPARCG SARCGPRRLG RRVPTRGRHT GRVDVGSLSG MTLYVVLFAV IFVESGILIG 
FWLPGDTILF AAGLMAADAA SNVSVAVLSI GVAAAATVGA AAGYYTGHRL GRPYLERRHA
TVLARTEEFY RRFGPITLVA ARFVPWARTF APVLAGTVAM SWSRFLIAVV LGALVWGTGL
ILLGYTAAAI PGLRDAAVWI ALVVIVISVI AGIAGELLRR RSGRLPDQGP R