| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4297 |
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| Symbol | |
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| ID | 3907265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5127815 |
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| End bp | 5129083 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881624 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_483372 |
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| Protein GI | 86742972 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0512015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC TCGGCGAGCG ACGCAGGTCC CCATTCCCCG CCACAGGTCA CACGGCCTCA
CCGGCTGCCC GAGCGGCCGC GAGGCCCGCG GTCTCCACAC GATCTTCACC GCCGTCCGCA
ATTCCATCGG AACCGCTCGA ACCGTCAGAA CCGCTCGAAC CGTCAGAACC GGTGACCGCA
CCCGCGGAGC CGCCCGGAGC CGGCCCGCTG GATCCCCTCC TCGCTGATCC GCACGTCACC
GATGTCCTGG TCAACGGGCC CGGTGAGGTC TGGGTGGAAC GCCGGGGCCG GCTCATCCGT
ACCTCGGTCG CGTTCGCGGA CGAGGAAGCG GTGCGGCGCC TGGCCGTTCG TCTCGCCGCG
ACGGCCGGGC GGCGCCTGGA CGCCGCGATG CCCTTCGCTG ACGTGCAACT GCGCGACGGA
ACCCGGTTGC ACGCGGTTCT GGCACCGATC GCGGTGCAGG GTACGTGCCT GTCGCTGCGA
CGGACCCGGC GTCGCCCCTT CACCTTCGAC GAACTCGTGC TCGCCGGAAC AATGAGCCCG
GCGGTGGCGG GCGTGCTGCA CGCGGTCCTG AGCGCCCGAC TTGCGATCGT GGTGACCGGG
GGCACCGGCT CGGGCAAGAG CACACTGCTT GCCGCACTAC TGGGAGCGGT GCGCCCCGAC
GAACGGATCG TGCTGGTGGA GGACACCGCC GAGCTCGTCA TGGACCGTCC GGGGATGGTG
CGGCTCGAGG CCCGCCCGCC GAACATCGAG GGCGCTGGCG AGGTGACCCA GCGCGATCTG
GTCCGCCAGG CGCTGCGCAT GCGCCCGGAT CGGCTGGTGC TCGGCGAGGT CCGCGGCCCC
GAGGTGCTCG ATCTCCTCGT CGCCCTCAAC ACCGGTCACG AGGGCGGGCT GAGCACCGTG
CACGCCAACG ACACCAGTGC GCTGCCCACC CGCCTGGAGG CTCTCGCCGC CCTTGCCGGG
CTGTCCCGCC CCGCGGTCCA CAGCCATATC GCGGCAGCGC TCCACACCGC CGTTCATCTT
TGCCGGGAGG CCGACGGCCG CCGTCGGGTC TGCGCGATCG GGGTGTTCCG CCAGACGGAC
AGCGGACTGG TTCAGGTCGT GCCGGCCCTG GTCGTTCCTG CCGCACCTTC CCGGAACGGG
CCAGCCCTGC GCGCCTGCGA CCCGACGCCG GCGGAGGGCC TGCCGATCCT GCGTGACCTG
CTGGACGTGC GCGGTGTCTC GCTTCCAGCC CTGGTTGACG CCGGGTCGCA GGTGCGGAGG
CGAGCATGA
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| Protein sequence | MTGLGERRRS PFPATGHTAS PAARAAARPA VSTRSSPPSA IPSEPLEPSE PLEPSEPVTA
PAEPPGAGPL DPLLADPHVT DVLVNGPGEV WVERRGRLIR TSVAFADEEA VRRLAVRLAA
TAGRRLDAAM PFADVQLRDG TRLHAVLAPI AVQGTCLSLR RTRRRPFTFD ELVLAGTMSP
AVAGVLHAVL SARLAIVVTG GTGSGKSTLL AALLGAVRPD ERIVLVEDTA ELVMDRPGMV
RLEARPPNIE GAGEVTQRDL VRQALRMRPD RLVLGEVRGP EVLDLLVALN TGHEGGLSTV
HANDTSALPT RLEALAALAG LSRPAVHSHI AAALHTAVHL CREADGRRRV CAIGVFRQTD
SGLVQVVPAL VVPAAPSRNG PALRACDPTP AEGLPILRDL LDVRGVSLPA LVDAGSQVRR
RA
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