Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4178 |
Symbol | |
ID | 3907143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4981531 |
End bp | 4983207 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881506 |
Product | monooxygenase, FAD-binding |
Protein accession | YP_483255 |
Protein GI | 86742855 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.876229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTAC AGCGGGACCA TGCCGTCATC GTCGGCGGAG GTATTGCGGG ACTCACCGCG GCGCGCGTGC TGAGCGAACA CTTCGCCGCG GTCACCATTC TCGACCGAGA CGCCCTGCCG ACAACCGTCG AAGAACGGCG CAACGTCCCG CAGGCGCCTC ATCTGCACGG CCTGCTGTTC GGCGGCGCAT CGGCGCTCGA CGAACTCTAC GGCGGCTTCA CGGTCGCGAT GACCGACCAG GGCGCGCCGC CGTATGACCC GCAACGCGAC GTCGCCTACT TCTTTCCCGA AGGCTGGATC CGGCGTGCGC CATCCGACAT GCGGTCCGTG TTCGGCACGC GGGCCCTGAC CGAGCACACC ATCCGGACGC TGACCCGCCG GCTACCGAAC GTCCGGTTCC GCCACGCCGA GACCATCGGC CTGCGCAGGG CCGGCGGCGA CCGGGTAGAC GCGGTCGTGT GCGACGACCT CGACGGTCTG GGCGGACTGA TCGAGGCCGA GCTTGTGGTG GACGCCGGCG GCCGCGCATC TCGCTCCCCG CACTGGCTCG CCGACGCCGG GTTCGACGCC CCGCCGGAGT CGACGGTGCA ACCGTTCCTC GGTTACGCCA CCGTGCACTG CCACTTGCCC GAGGATGCCC TACCGGGAGA CCTACGGGCA GTGTGCGCGC CACCGGCACC GCACAACACC AGAGGTGCGT TCCTCCTGCC GGAGGAGAAC AACCTCTATG GCCTCATGGC CGTCGGGACC AGCCGTGACT TCCCGCCCGG CGACCCGGCG GGCTTCGACG AGTTTCTCCG GACCGCCGTC ACCCCCGTCC TGCACGAGAT GTGGCAACGT GCCGAGCCCG TCACCGACAT CAGGACGACG AGGATGTCAG TGAATCGGCT CCGCCGCTGG AACGAGCTGG CTCGGCGGCC ACAGGGGTTC ATCGCGGTCG GCGACGCGGT GGCCGTATAC AACCCGGTGT ACGGCCAAGG CATGACCGCG GCCGTCCTGC AGGCGGTGGC CTTGCGCGAC CGCCTGCGTC AGGCGGACGA TCTGGACACG GCCGTCGAGC GTCTCCACGA CGACGTCATG GCCGTCACCT CGTTCGCCTG GCAGGCCGCG ACCGCATCCG ACCTGGTCTT TCCCGTGACG GAAAGCCGTA ATATGCCCGC CCCGACACCC GAAGAGCGGG CGGGCGCACA ATACCTGGGC ATGGTGCGCG CCACCGCCGT CGACGACGCT TACGTCGCGG GCGAATTCTA CCGGGCGCTG GGCTTGATCC GGCCCGAGTT CCTCCTCGCT GACGAGGTCC GCACCCGAGT CGAACGGTGG GTGGCGGACC CGCCGGCTCC GACCGACGAC CTGTCGCGCC CGCCTGCGTG GGCCGATGCC GATCCACCGA CACGGAGTCG GCCGCCGTCG GGCACTGCCG CCGTCGGGCA CTGCCGCCGT CGGGCACTGA GGAATGACGG GCGGCGGATC CCGGGTAGGA AAGCACCCCC AGCCACTCGA AGGCGCCTTC GAGTACTCCT CTACCGCGGA CATCCCGAGG GTGGGGTGCT TTCCATCGTT GGACGGCGCC CCACCCTCCG GTCTGCCTCG GCGGCTACGC CCCGGCGAAC GGCTGCTGCC CGCCGAACCG CTGCCCGGCC TGCTCCGCCC CGGCCTGCTC CGCTTGGCCC GCGGTAA
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Protein sequence | MPVQRDHAVI VGGGIAGLTA ARVLSEHFAA VTILDRDALP TTVEERRNVP QAPHLHGLLF GGASALDELY GGFTVAMTDQ GAPPYDPQRD VAYFFPEGWI RRAPSDMRSV FGTRALTEHT IRTLTRRLPN VRFRHAETIG LRRAGGDRVD AVVCDDLDGL GGLIEAELVV DAGGRASRSP HWLADAGFDA PPESTVQPFL GYATVHCHLP EDALPGDLRA VCAPPAPHNT RGAFLLPEEN NLYGLMAVGT SRDFPPGDPA GFDEFLRTAV TPVLHEMWQR AEPVTDIRTT RMSVNRLRRW NELARRPQGF IAVGDAVAVY NPVYGQGMTA AVLQAVALRD RLRQADDLDT AVERLHDDVM AVTSFAWQAA TASDLVFPVT ESRNMPAPTP EERAGAQYLG MVRATAVDDA YVAGEFYRAL GLIRPEFLLA DEVRTRVERW VADPPAPTDD LSRPPAWADA DPPTRSRPPS GTAAVGHCRR RALRNDGRRI PGRKAPPATR RRLRVLLYRG HPEGGVLSIV GRRPTLRSAS AATPRRTAAA RRTAARPAPP RPAPLGPR
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