Gene Francci3_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4173 
Symbol 
ID3907138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4975745 
End bp4976557 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID637881501 
Producthypothetical protein 
Protein accessionYP_483250 
Protein GI86742850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.883416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG CCACCGCTGA CAAGTCCCAT AGCTTCGATG TTTTCCAGCA CTACGAGCGC 
CTCCAGTGGA AGGTTTCCGA CCTCGGGCTG GAAAACGTCC GGAGTGACCT CGTTCATCCC
GTCTACATCT CGCTTGTCAA GGGCGTTGTC ATGGGCGAGG CGACGTCTCT CCCCGGGCTG
CACGGTTTTC TCAGCGAGTT CCACGACGAC TACGACTGCT CGGCCTTCGT GGCCATCTGG
GCCTACCAGG AGCTTCAGCA TCACTACGCC TTCCGGGCCT GGCTCAAGGC GGTGGGTGTC
CACATCGACC AGGACAAGAT CGAGGCTCTG CGTGAGCCGT ACGAAGCCGG TATCACGCCG
AGTGCGACCC TGACCACGAA CGTGATCTCT GAGATCATCG TCAACACGGT CTACCGGGCG
ATGTCGGAGT GGGTGGAGGA GCCCGTGCTG GCCGACCTGT TTCTCCGCGC AAGCCGCGAC
GAAGCAGGGC ACGCCCGCGA GTTCCTCTTC TACTTGAAGC GTCGTCTGGA ACTCCACCCG
CACGAGCTGA GGTCAGTCCT GGAAAGGATT CATTTCTACG TTACGAGCCC GCGGCTCAAC
CACCCGGTCG GTGTCTACAA GCATCAGCGC GTCGAGGAGA TGCAGGGGCA CGAGACCGTC
GACGACGTGA TCGATGTCTA TCTCCAGTTC TCTCCGCCGG ATGCGCTGGA AAAGCTCCAG
GCCAAGCTCC GGCGCATGCT CGGAACGGCG GTCGGCCGGG ACTTGAGCCG AAACTCCGGC
ATCCGCCACG CGATGGCCGA AATAGTGGCC TGA
 
Protein sequence
MPTATADKSH SFDVFQHYER LQWKVSDLGL ENVRSDLVHP VYISLVKGVV MGEATSLPGL 
HGFLSEFHDD YDCSAFVAIW AYQELQHHYA FRAWLKAVGV HIDQDKIEAL REPYEAGITP
SATLTTNVIS EIIVNTVYRA MSEWVEEPVL ADLFLRASRD EAGHAREFLF YLKRRLELHP
HELRSVLERI HFYVTSPRLN HPVGVYKHQR VEEMQGHETV DDVIDVYLQF SPPDALEKLQ
AKLRRMLGTA VGRDLSRNSG IRHAMAEIVA