Gene Francci3_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4153 
Symbol 
ID3907118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4953359 
End bp4954309 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content74% 
IMG OID637881481 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_483230 
Protein GI86742830 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCTG TGGTGATGGA CCGGTTCGGC GGCCCGGAAG TACTCACGGT CCGCGACGTC 
GCGGATCCGG TTCCAGGACG CGGCCAGGTG CTGGTAGCGG TCGAGTACGC CGGCATCACC
TTCGTCGAGA CGCAGGTCAG GGCTGGCCGT GGCCCTGCGC TGCGAAACCC TCCGCCGCTG
CCCCGGGTCC CGGGTAACGG CGTCGGCGGA CAGGTCGTCG CCGTCGGAGC GGACGTCGAC
CCGGCCCTCG CCGGAGTGGT GGTCGTCACG ACGACGGGAG GCACCGGCGG CTACGCCGAG
CTCGCCGTCG CGGATGCGGA CGACCTGATC CCGGTGCCCT CCACCGTCCC GGTGCGGGAC
GCGGTGGCGC TGCTGGCGGA CGGCCGCACC GCGGTCCTCC TGCATGGCCA GGCGGAGGTG
AAGCCCGCCG AGTCGGTGCT GGTCGAGGCA GCCGGCGGCG GCCTCGGCAG TCTGCTGGTC
CAGCTCTCGG CGGCCGCCGG CGCCACGGTG ATCGGTGCCG CGCGCGGCAC CGCCAAACGT
GAGCTGGTGA TGTCCCTGGG CGCGGCGGCC TACGTCGACT ACTCCCGGCC GGGCTGGACG
TTGGAGGTCG TCGAGGCCAC CCGCGGGACG GGTGTCGACC TGGTCTACGA CGGTGTCGGG
GGTGACATCG GCGCCCACGC CCTGACCACC CTGCGGGCCG GCGGACGGAT CAGCATCCAC
GGAATGGCCA GTGGCAGCTG GACCGAGCCG CCCGCCGGCG TGACGGTGAT CAGCGGTGAT
ACGCCGACAC CGGAGCAGAT GCGTGCGCTC GCCGCGGAGG CGCTCGCGCA GGCGGCGGCC
GGCAGGCTAC GCCCGATCAT CGGTCAGACC TACCCGCTGG GCGAGGCGGC CGCAGCCCAC
CAGGCGATCG AGGACCGGGA GACGGCCGGC AAGACCCTGC TGGTCCCATG A
 
Protein sequence
MRAVVMDRFG GPEVLTVRDV ADPVPGRGQV LVAVEYAGIT FVETQVRAGR GPALRNPPPL 
PRVPGNGVGG QVVAVGADVD PALAGVVVVT TTGGTGGYAE LAVADADDLI PVPSTVPVRD
AVALLADGRT AVLLHGQAEV KPAESVLVEA AGGGLGSLLV QLSAAAGATV IGAARGTAKR
ELVMSLGAAA YVDYSRPGWT LEVVEATRGT GVDLVYDGVG GDIGAHALTT LRAGGRISIH
GMASGSWTEP PAGVTVISGD TPTPEQMRAL AAEALAQAAA GRLRPIIGQT YPLGEAAAAH
QAIEDRETAG KTLLVP