Gene Francci3_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4151 
Symbol 
ID3907116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4950607 
End bp4951554 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID637881479 
Productactinorhodin polyketide synthase bifunctional cyclase/dehydratase 
Protein accessionYP_483228 
Protein GI86742828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG CCCCATTCCT GCGCAGGGAA CACGAGATTC GGGTGGGCGC TCCAGCCGGT 
TTCGTCTACC GGCTGCTGGC CGGGCTCGAG CACTGGCCGA GCATCTTCGC CCCGTTTGTT
CACGCCGAGA GGCTGGGAAC GGACGGCGAA CTTGAACGGG TGGGGATGTG GACCACATCC
GGCACCCGGG TCGAGCGCTG GGTCGCGTTC CGTCGGTGTC AGCAGGAGGA TCTACGGATC
TGGTTCCGCG TGGAGCAGCC ACCGCCGCCG CTGGAGTCGA TGGAGCGTGC CTGGACCGTC
GTCCCGGTTT CCGACGGGGA ATGCCTGCTC AGGCTGGCGC ATGAGCTGCG CGTGACGGCG
GGCGTATCGG CGGACATCGG TGCGGTGGTC CGGCAGGTCG ACGTGGTGGC CGAGGCGGAG
ACGGCCGCGG TGCGGGCCGC CGCGGAGCGG GCGGTGAGTG CACCCGACTT CCTGCTTACG
CTGCACGACG ACGTGCGTGT TGACGGGCCG GCCGATCGTG TCTACGACTT CCTGTATGCG
GTCGACCGGT GGCCCGACCG GCTGCCCCAC GTGACGCGGG TGGACGTCCA GCAGGACGAG
CCGGACGTCC AGCTCGTGGA GATCGACACC GCGGAGCGCC GGGGTGGTGT GCTGACGACA
CGGACCGCGC GGGTGGGCCG ACCACCCCGC GGGATCGTCT ACAAGCAGCT ACGACTGCCG
CCACTGGCCA GCAGCCATCA CGTGCGGTGG GACATCGAGG ACGGCGGCGA TCACACTGTG
GTCCGCTCGA TCCAGACCGT GGTGATCAAC GGCCCTGGGA TCGCGGAGCT CCTCGGCGCG
AGCACCAGCC TGGAGCAGGC CCGTTCGTTC ATCCGCACCG AGCTCGGCTC AAAGGTCCGG
CTGATCCTGG ACCAGGCTGG GCAACACGTG GCGGACGCCG CCGGATAA
 
Protein sequence
MTLAPFLRRE HEIRVGAPAG FVYRLLAGLE HWPSIFAPFV HAERLGTDGE LERVGMWTTS 
GTRVERWVAF RRCQQEDLRI WFRVEQPPPP LESMERAWTV VPVSDGECLL RLAHELRVTA
GVSADIGAVV RQVDVVAEAE TAAVRAAAER AVSAPDFLLT LHDDVRVDGP ADRVYDFLYA
VDRWPDRLPH VTRVDVQQDE PDVQLVEIDT AERRGGVLTT RTARVGRPPR GIVYKQLRLP
PLASSHHVRW DIEDGGDHTV VRSIQTVVIN GPGIAELLGA STSLEQARSF IRTELGSKVR
LILDQAGQHV ADAAG