Gene Francci3_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4116 
Symbol 
ID3907080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4920400 
End bp4920897 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content60% 
IMG OID637881444 
Product50S ribosomal protein L11P 
Protein accessionYP_483193 
Protein GI86742793 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATA TAGTCCCCGA TGGATCGCCA TTAGTTTACG ATAAGAGACT CGCCGAGAAG 
GAACTTGGGA TGCCCGCTAA GAAGAAACTC TCCGCCGTCG TGCGAATCCA GCAGGAGGGT
GGAAACGCCA ACGTCGCCAA GATTGGCCAG GCTCTCGGTA CCTATGGCGT CAACATCGTC
GGGGTGATGA AGGAGTTCAA CGAAGCCTCG GCGATCCACC ACGGGCTGCA GGTCTCGGCA
GATGTTTCGA TCTTCGAGGA CCGCTCCTTC GAGCTCTCCG TCAAGTCGCC CGCCACGACC
AGTCTGCTGC TCCAGGCCGC GGGTGTCCGC AAGGGCAGTC CGAGGCCGCA TGCCGAGCAC
GCTGGTGCGG TCACCGTCAG CCAGCTCCGT GAAATCGCCA AGGTCAAACT GCCCGACCTC
AACGTCGATT CGATGGAAGC GGCGGAAAAG ATAGTGGCTG GAACGGCGCG CTCCATGGGA
ATAAAGGTCA CCGGTTGA
 
Protein sequence
MSHIVPDGSP LVYDKRLAEK ELGMPAKKKL SAVVRIQQEG GNANVAKIGQ ALGTYGVNIV 
GVMKEFNEAS AIHHGLQVSA DVSIFEDRSF ELSVKSPATT SLLLQAAGVR KGSPRPHAEH
AGAVTVSQLR EIAKVKLPDL NVDSMEAAEK IVAGTARSMG IKVTG