Gene Francci3_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4105 
Symbol 
ID3907069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4912419 
End bp4913333 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID637881433 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_483182 
Protein GI86742782 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCG CGGCATTCTA CACCTTCGGT GGTCCGGAGG TGCTACAGGT GGTCGAGGTT 
GCCACACCCG AAGCTGGGCC GGGAGAGGTT CGGGTCCGAG TCGAGGCGGC GGGCGTGCAA
GCGTACGACT CGTCGGTACG GTCCGGCTGG ACACCGCCGG GGCAGACCCT GCGGTTCCCG
CAGATAGTCG GCAACGACTT CGCCGGTGTC GTCGACGAGA TCGGCACCGG CGTCACAGAC
TTCCGGATCG GCGACGAGGT GCTCGGCTGG GCCATGCTCG CCAGCTGCGC CGAGTACGTC
GTCGTCCCTC CAGAGCAGGT CGTCTCCAAG CCGTCCGGGA TGACCTGGCC GCAGGCGGGC
ACCCTGTCGG CGTCGGCGCA GACCGCACAC ACCGCGCTGG ACGAACTGAA GGTCAGCGTC
GGCGACACTC TGCTGATCCA CGGCGCCTCC GGCGGCGTCG GAACGGTCGC GGTGCAGCTG
GCCCTGGCCG CGGGCGCGAC GGTGATCGGA ACGGCCGGCC CGGCGAACCA GGACTACCTG
CGCTCGCTGG GGGCCACACC GACCACCTAC GGCGACGGAC TGGTCGACCG CGTGCGAGCC
CTGGCACCCG GTGGTGTCGA CGTCGCCCTG GACGCCGCGG GCGGCGCGGC CCTGGATGCC
TGCCTCGAGG TGGTCGCCGA CCGGAGCCGG ATCGGCACCC TGGTGGATTT CGCCCGGGCG
GACGAGCTCG GCGTACGATT CCTGCGCAGC CAGCGCTCGG GTCAGCGGCT ACGGGCGATC
ACCGACCTGT ACCGCGCCGG GCGACTGACG CTGACCGTGT CGGAGGTCTT CCCACTGGAC
CGGATCGCCG ACGCGCACCG TCGGATCGAC ACCGGCCATG CCCGCGGCAA GACCGCCGTC
CTGCTCCGGG GGTGA
 
Protein sequence
MRAAAFYTFG GPEVLQVVEV ATPEAGPGEV RVRVEAAGVQ AYDSSVRSGW TPPGQTLRFP 
QIVGNDFAGV VDEIGTGVTD FRIGDEVLGW AMLASCAEYV VVPPEQVVSK PSGMTWPQAG
TLSASAQTAH TALDELKVSV GDTLLIHGAS GGVGTVAVQL ALAAGATVIG TAGPANQDYL
RSLGATPTTY GDGLVDRVRA LAPGGVDVAL DAAGGAALDA CLEVVADRSR IGTLVDFARA
DELGVRFLRS QRSGQRLRAI TDLYRAGRLT LTVSEVFPLD RIADAHRRID TGHARGKTAV
LLRG