| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4098 |
|---|
| Symbol | |
|---|
| ID | 3907062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4905938 |
|---|
| End bp | 4906897 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881426 |
|---|
| Product | actinorhodin polyketide synthase bifunctional cyclase/dehydratase |
|---|
| Protein accession | YP_483175 |
|---|
| Protein GI | 86742775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTACGA AGCACCGGAC ATCGCATCGA GAAGTGGTGG CGGCCCCGGC GGACCTGGTC
TTCGAACTGC TCACCGAGGC TGAACGGTGG CCGGCGATCT TCGGTCCGAA CATCTTCTTG
CGCTACCTCG AGCGTACGGA GAGCGAGGAA CACTTCCAGC TCTGGGCCCT GGTCGGCGGC
GAGGTCAAGA CGTGGACGTC GCGGCGTGAG GTCGACCGGC ACCTGCGGAC GATCGGCTTC
CGCCAGGAAC GGAGCCAGCC ACCGGTGGCG GCGATGAGCG GACGCTGGCA GGTCCTGCCC
TTGCCCGGTG GCCGCACCGA GGTGATCCTG GACCACGAGT TCACCGCGGT GGACGACGAC
GCCGCTGCCG TCCAGTGGAT CAGTGCGGCC CTGGAACGCA ACAGCGTCGA AGAGTTGGCG
GCGTTGCGCC GGGTGGCGGA GCTCGGTCAT CCGGTCGCGG AAGTCGTCTT CACCTTCGAG
GACACCGTCG AGCTCACCGG GTCGGCCGAG GAGGCGTACG ACTTCATCGA CCGGGCGGAC
CGCTGGCCGG ATCAGCTCCC GCACGTTCGC CGTGTGGTGC TCACCGAGGA GATGCCGGGC
ATCCAACAGT TGGAGATGGA CACGGTCAGC GGCGATGACG GGTCGACGCA CACCACCCGG
TCGGTGCGGG TGTGCCTGGC GAACGACAGA ATCGCCTACA AGCAGACCCG GCCACCCTCG
ACGCTTCTCG GGCACAGCGG GGTGTGGATC TTCCATCGGG TGCCGGACGG GCCCGACTCG
GTCACGGCGA GACACACCGT CGTGTTGGAC CCGGACGCGC TGCGCACGGT GCTCGGCCCG
AGCAGTTCTC TCGCCGAGGG ACGCCGCTAC CTCCGGGACG CGTTGGGGGC CAATAGCCGC
CGGACGCTGG CCGGCGCGGC GGCGCCCGTA TCCTCCACCG AGGAGCGGGA AGTCCGGTGA
|
|---|
| Protein sequence | MPTKHRTSHR EVVAAPADLV FELLTEAERW PAIFGPNIFL RYLERTESEE HFQLWALVGG
EVKTWTSRRE VDRHLRTIGF RQERSQPPVA AMSGRWQVLP LPGGRTEVIL DHEFTAVDDD
AAAVQWISAA LERNSVEELA ALRRVAELGH PVAEVVFTFE DTVELTGSAE EAYDFIDRAD
RWPDQLPHVR RVVLTEEMPG IQQLEMDTVS GDDGSTHTTR SVRVCLANDR IAYKQTRPPS
TLLGHSGVWI FHRVPDGPDS VTARHTVVLD PDALRTVLGP SSSLAEGRRY LRDALGANSR
RTLAGAAAPV SSTEEREVR
|
|---|
| |