| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4078 |
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| Symbol | |
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| ID | 3907041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4883451 |
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| End bp | 4885700 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881405 |
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| Product | putative integral membrane export protein |
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| Protein accession | YP_483155 |
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| Protein GI | 86742755 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG TTGCGTTGAC AGGCGTCGCA CGTCTGTGTG CCCGCCGTCG CTGGATCGCG
GTCGGCATGT GGGCGGTGCT CCTCCTGCCC GCGGTGTTCT TCGTGATCGC GGGTCACGCG
CAATACAGCC ACGATGTGAC GGTTCCCGGT TCCGAGTCGC AGCGGGCAAT GAATCTGGCG
CGCAAGGTGA TTCCGGGCGG CGTCCTGCCG GACACCGAAC AGATCGTGCT GCACGCCAGG
CGCGGCACGC TGGCGGACCC GCTGGTGCAC CGACAGGTCG AGGAGCTGCT CGCCGATGTC
GGGAAGCTGC CGGGGGTACT CACCGTCGCC GACCCGTTCG GACCACTAGG CAGGATGGTG
CTGGGTGTGT CACCGGTCAG TGCCGACGGG CGCACGGCGG TGGCTCCGGT AATCATGAAA
GCGTCGGCGC TCGAACTCGA CCTCGGCGCG ATCAAACGGG TCTCGGCCAC GGCCCGGTCC
TACGGCGGTC CCGAGCTTCA GGTGGAGCTG GGCGGACCGG GCGCGACCGC GCTCACCTCG
GCCGGCGTCC CGATCCGACC GCTGCTGGCC GCTCTCGCCG TCGCGCTGGC GGTCTTGTGC
CTGACCCTGC GTTCGAGGGT GGCCGCCATG ATCGCCGCTG TCGTCGCGGC CATGGCCACC
GTCACCACCG TGGCCGTCAC GACAGTACTG TCCCACCATG TCCTGACTAC TCCCTTCGCC
GCTCTGCTTG GCGGCATGAT CGCCCTCGGG GTCAGCCTGG GCGGGTCCGT CCTGGTCGTG
TACCGGGCGC AGACCGCGTT GGCACGGGGT GTGGGCCCGG TCGACGCGGC CACCGAGGCG
ATGGTGAAGT CGGTCGCCGC CCTGGCCTCC GGTGGCGTGT GCCTGAGCGT GGCGATGACC
GGCGTGCTCC TGCTGGACCT GGGCCCATTC ACGGGAGTCG CCCTCGCGGC CGGGGTGGCC
GGGGTGCTCA GCGCCCTGGT CACCCTCACG CTGTTGCCAG CGCTGCTCGT CCTCGGCGGC
ACCCGGATGC TGGGCTGGGT CGGACGGCAT TCCCTGACCA CGACGGGTCG TGGCCTACCG
CACCGGCCGG GCGTGCGATC GTGGTGGGCC AGGCAGGTGG GGCGCCACCC GGCTGTCGCC
GTGGCCGTGG CGTGTGTGCT GCTTGTCGCC ATGGCGGCAC CGGTGGTAAC CCTGCGGCTC
GGTGGCGCCG ACGCGGGCGC GGAGCCCACG TCGGCCACCG CGCGACGCGC GTATGACGTG
GTCAGCCGCG ACTTCTTCAG CGGTCTCAAC GGGCCGATGC TCGTCGTCGT CGACCGGGGG
GAGGGCAGCC GGACCGTCGC CGTGACCGAC GTCGTCGCCG CCCTCAACAC GACGCCGGGG
GTCAAACACG CATACGTTTC GTTCGACAGT CCCGAGTCGG GCCTGGCCCT GATCCAGGTA
CTGCCGCAGG CGGGGCCCCG GTCGACGGAC TCCTACGATC TGGTGCACCG ACTGCGCAAC
GACGTCCTGC CGGCGGTACT GCGGCCCACC GTGAGCCGCG CTTACGTGGG CGGGCAGGCG
GCGTTGTTCG CCGACATGGC CGCGGACTTC CGCGACGCGC TGCCGATGTT CGCGTTCGTG
GTCCTGCTCG CGGTGGGCGC GCTGACCTTC CTCACGGCGT CCTCGCGCGT CACCGCCGCC
GTGCTCGCCG TTTCGGAGCT GTCGTGCGGC CTTGCGACGG TCGGTGTCCT GGCGACGGTC
TTCCAGCAGG ACCGTTTCGC CGGGAAACTG GGCCTCCAGG CCGGTCCGAT CGAACCGTTC
ATCCTGGTCT TCGTGCTGGT CGTCGGGTTC GGCCTATCCC CGGGCATGAA CCTGAGCCTG
CTGAGCAGAC TGCGCGAAAC CGATGCGCCA GGCTGGCGGG CGCTCGAAGG CGACGCGGTC
AGCCGCGGCC ACGCCGACGT GGGGCACGTC GTCCTCACCA TGAACCTCAT CATGATCCTG
GCGTTGTCGG TGGTCGTGGC GCAGCCGTCC CGCACGCTGA AGCTGCTCGG GGTGGGTCTG
GCGGTCGGTG TGGCGCTCGA CGCATTCGTG GTGCGAGCGG TCGTCCTCCC TGCGCTGGTG
CACCTGGATC GGCGCCGTGA AACCGCTGGC GGCGTACCCG CGCAGCGCCG GCCGGCGAGG
GCGGCCACGA GGTCGTACGA CCCGCCGTCG GCGCCATCCC ACGCGGGCAA CGGCACGCGC
GGCGGCCGTT TCTCCCGGAG GAGTACATAG
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| Protein sequence | MLIVALTGVA RLCARRRWIA VGMWAVLLLP AVFFVIAGHA QYSHDVTVPG SESQRAMNLA
RKVIPGGVLP DTEQIVLHAR RGTLADPLVH RQVEELLADV GKLPGVLTVA DPFGPLGRMV
LGVSPVSADG RTAVAPVIMK ASALELDLGA IKRVSATARS YGGPELQVEL GGPGATALTS
AGVPIRPLLA ALAVALAVLC LTLRSRVAAM IAAVVAAMAT VTTVAVTTVL SHHVLTTPFA
ALLGGMIALG VSLGGSVLVV YRAQTALARG VGPVDAATEA MVKSVAALAS GGVCLSVAMT
GVLLLDLGPF TGVALAAGVA GVLSALVTLT LLPALLVLGG TRMLGWVGRH SLTTTGRGLP
HRPGVRSWWA RQVGRHPAVA VAVACVLLVA MAAPVVTLRL GGADAGAEPT SATARRAYDV
VSRDFFSGLN GPMLVVVDRG EGSRTVAVTD VVAALNTTPG VKHAYVSFDS PESGLALIQV
LPQAGPRSTD SYDLVHRLRN DVLPAVLRPT VSRAYVGGQA ALFADMAADF RDALPMFAFV
VLLAVGALTF LTASSRVTAA VLAVSELSCG LATVGVLATV FQQDRFAGKL GLQAGPIEPF
ILVFVLVVGF GLSPGMNLSL LSRLRETDAP GWRALEGDAV SRGHADVGHV VLTMNLIMIL
ALSVVVAQPS RTLKLLGVGL AVGVALDAFV VRAVVLPALV HLDRRRETAG GVPAQRRPAR
AATRSYDPPS APSHAGNGTR GGRFSRRST
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