Gene Francci3_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3997 
Symbol 
ID3906958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4781756 
End bp4782484 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID637881326 
Producthypothetical protein 
Protein accessionYP_483076 
Protein GI86742676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.366143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.539174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCC TTCCACGCGG TGAGGACCGG GCGGATCAGG TCCCACGCCT CATCGGACAG 
GTCACTGGGG TACGGCTTGC GTTCTGCCAT GTCTTCCAGC AGAACGCGCC AGCCGGCGAA
CGCAAGACGA TCAACTCCGC ACCCCAGAGA TCAACTCAAG CTGAGACCCG GCGAAAGCGT
GCAGAACGCC CACTCAGCGA TGGCATCAAG GTTGACGGGC AAACGGAGGC GATCACCCGG
ATCTGCTGGT GGCTGGACGC CTGGGAGCAG CAGAAGCCTG GCGGCGGCTC CTGGTGGCCG
CAGATCGTCA CACTGACCGA CCTTGACCGC GGCACCACCA GCCAACTGGG CCCGCTCAGA
CCTTCCTGGT GTTACGGAAC TCCCGGCATT GCCCGCTCCC AGCAACTCGC CGCCCGTGCC
CTGCACGAAC CCGCCCGCCA ACGCCGCGCC GAGACCGCCT TCCTCGACTG TCTGAACGAC
CCGACGCAGC TGAGCCGCCT CACCGACCGG AGCCTGTGCC ACGGGACCGG CGGGCTCCTC
GCAACCGCCC GCAACATCGC CGCCGACGCC CTCACCCCGA TCTCCCTCAC ACAGCCGCAA
CTCCTGCACC AGCCCGCCGC TGCCGAGGAC GACGAACCCC CGGGTTTCCT GGTCGGATCG
GCCGGCGCAG ACCTGGCTAC CACCGCGACC ACGACAACCT CGTGGGACGC CTGTCTCCTG
CTCCGCTGA
 
Protein sequence
MPGLPRGEDR ADQVPRLIGQ VTGVRLAFCH VFQQNAPAGE RKTINSAPQR STQAETRRKR 
AERPLSDGIK VDGQTEAITR ICWWLDAWEQ QKPGGGSWWP QIVTLTDLDR GTTSQLGPLR
PSWCYGTPGI ARSQQLAARA LHEPARQRRA ETAFLDCLND PTQLSRLTDR SLCHGTGGLL
ATARNIAADA LTPISLTQPQ LLHQPAAAED DEPPGFLVGS AGADLATTAT TTTSWDACLL
LR