Gene Francci3_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3943 
Symbol 
ID3906902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4720020 
End bp4720256 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content61% 
IMG OID637881270 
Productputative acyl carrier protein 
Protein accessionYP_483022 
Protein GI86742622 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.616422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGG AGCGACTACA GCAGATCTTC CGGGAGATCT TCAGTGACGA CGACCTCGTC 
ATCAGCGACG GAATGACCGC CGCCGATGTA CCGGGGTGGG ACTCGCTCGC GCATATCAAC
CTCATCTACG CGGTCGAACG CGAGTTCTCG ATCCAGATCG CCGATGAACG GCTCGCGAGT
TTCGCCACCG TCGGTGACCT GCGCGAGCAC ATCGAGGAGC TGAGTGGTGT CCACTGA
 
Protein sequence
MVQERLQQIF REIFSDDDLV ISDGMTAADV PGWDSLAHIN LIYAVEREFS IQIADERLAS 
FATVGDLREH IEELSGVH