Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3932 |
Symbol | |
ID | 3906891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4706333 |
End bp | 4707115 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637881259 |
Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
Protein accession | YP_483011 |
Protein GI | 86742611 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.135796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA CCGCTGTCGC CGTCGCCAAC GGTGCGGGGA GCACCGGGAA CAGCGGCCCG GTCTGGACGA TCGTGCTGGC CGGCGGCGGC GGCACGCGTT TCGGCGGGCC GAAACAGTTC TTCGACCTCG GGGGTGAGCC CCTGCTCGCC CATCCGGTCG CGGCGGCGCG GCCCGCCAGT GACGGCATCG TCGTGGTCGT CCCCGCCGCC CTGATCGGCC ACTGGTCACC GCCGGACGGA GTGCGGATGG TCGCTGGCGG CGCCACCCGG GCCGAGTCCG TCCGGGCGGG GCTGGCTGCC GTGCCCGCGG ACGCCGGGGT CATCGTGGTC ACCGACGCCG CCCATCCACT CGCGACTCCC GCCCTGTACC AGCGGGTCAT CGACGAGGTC CGCGCCGGCG CCGACGCGGC CGTACCCGGG CTCCCGCTCA CCGAGGTCGT CAAGGAGATC CGCTCGACGG TGCTCGGCAG CCCCCCCGAC GACACCCCCC GGTTGGTCAC CGGGGCCTCG CTGCCGCGGG AGACTCACCG GCTCGTGCAG ACCCCGCACG CCTTCCGGGC GGACCTGCTG CGCTCCGTGC ACGCGGAGGC CCGCGAGGCC GTCGAGGACT CGGCGATGGT TGCCGCGGCC GGCGGCCTGG TCGTGGTCGT CCCCGGCGAG CCGGCGAACA TCCATGTCAC CACGCCGGAC GAACTCGCCA TGGCCCGGCT GCTTCTCACC CATGTTCGTT CCGAGGGGGA ACCTAATGAG TTCGGTACTG GTCGAATCCA CGCTGTCCGA TGA
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Protein sequence | MTDTAVAVAN GAGSTGNSGP VWTIVLAGGG GTRFGGPKQF FDLGGEPLLA HPVAAARPAS DGIVVVVPAA LIGHWSPPDG VRMVAGGATR AESVRAGLAA VPADAGVIVV TDAAHPLATP ALYQRVIDEV RAGADAAVPG LPLTEVVKEI RSTVLGSPPD DTPRLVTGAS LPRETHRLVQ TPHAFRADLL RSVHAEAREA VEDSAMVAAA GGLVVVVPGE PANIHVTTPD ELAMARLLLT HVRSEGEPNE FGTGRIHAVR
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