Gene Francci3_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3912 
Symbol 
ID3906680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4681722 
End bp4682771 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID637881238 
Producthypothetical protein 
Protein accessionYP_482991 
Protein GI86742591 
COG category[S] Function unknown 
COG ID[COG2845] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC GTGAAGATTC GGCGCCACCG GGACCCCCGG CGACCGCACC CGCGGCGACC 
ACCGGCGTCG TCCGGGTTCG GCAGGCCTTC CTGCTGGTAG CCGTCACCCT GGGTCTGCTG
GCGGTGCTCC GCGCCTCGGC GATGGTGCAC GCGGGCGAGG GCATGCGCCC AGGACTCACC
CGCACGCTCG TGCTGGGCGT GGCCCGGCCG ACCGAACGGA TCACCCGGAC CGTCCATCTC
GACGAACCGG ACCGGTGGTT GTCGCGCGCG TTTGGTCACG ACGCCAAGTC CGGCGGCACC
TTCTCCGAGC TGGCATCGGC GGCCAGCCGA GCTGAAGCCG AGCCCGATCG CCCCGGCGCC
CTCGGGCCGG GCGCCGCCGG TTCCCACCGC TCCCCGCTGC CACCGCGCCA CCCGACCGCG
GCCGATCCGC TGCGCGTCCT GGTCACCGGG GACTCGCTGA CGGAATCACT CGGTCCGAGC
ATCATGAACA GTGCGCCCGC CACGATCCGG GCACAGACCG AGACGCGGTT CGGCACGGGC
CTGGTGCGGC CCGACTTCTT CGACTGGGCC ACCCATGCCC GGGCGCAGAT CACGCAGCGC
AACCCAGAGC TGGTGATCGT CGCAATGGGC GGGAACGACG GCCAGGGCAT CACGCTTGCG
GACGGAACCG TCCTGCCGGC CGGATCGGAC GCGTGGACCG CCGAGTACCA ACGGCGTGCC
ATCGTCGTGA TGCGGATCTG GAGCGGCGAC GGAGCCCGCC GAGTGCTGTG GCTCAGCCTC
CCGCCGGCCC GGTCGGACCA GCTTAACGGC TACTTCCGCC GGCTGAACGA GGCGACCCTC
GACGCCACGA CCAGGGTGGT CGGAGCCCGA TATCTCGATC TCACCCCGTG GTTGTCGAAG
AACGGCGCAT ACAGCGACTA CCTCACCGGC ACGGACGGTA ACACCGTCCT GGCCCGAGCC
CGTGACGGCG TGCACCTGAG TCTCGACGGC GCGCGGATCG CCGCGGGACA CGTTCTGGAA
ACCGTGCGCA GCACGTGGAA CCTGCGGTGA
 
Protein sequence
MTEREDSAPP GPPATAPAAT TGVVRVRQAF LLVAVTLGLL AVLRASAMVH AGEGMRPGLT 
RTLVLGVARP TERITRTVHL DEPDRWLSRA FGHDAKSGGT FSELASAASR AEAEPDRPGA
LGPGAAGSHR SPLPPRHPTA ADPLRVLVTG DSLTESLGPS IMNSAPATIR AQTETRFGTG
LVRPDFFDWA THARAQITQR NPELVIVAMG GNDGQGITLA DGTVLPAGSD AWTAEYQRRA
IVVMRIWSGD GARRVLWLSL PPARSDQLNG YFRRLNEATL DATTRVVGAR YLDLTPWLSK
NGAYSDYLTG TDGNTVLARA RDGVHLSLDG ARIAAGHVLE TVRSTWNLR