Gene Francci3_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3838 
Symbol 
ID3905586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4599621 
End bp4600043 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content72% 
IMG OID637881164 
Producthypothetical protein 
Protein accessionYP_482917 
Protein GI86742517 
COG category 
COG ID 
TIGRFAM ID[TIGR03544] DivIVA domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0245433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGG CCAGCCTGCC AGAATCACCA CGATCGGCGG GCCGTGGCAC GATCGGATGC 
GTGGTGCTCG TCATCGAGAT TGTGATCGTG GCCGCCGTCG TCTTCGCGGT GGCCGCGCTG
GCCGTCGGTC GCTTCGATCG GCTCGCCCCG GCGCCGCCGG ACGGCGCTCC TACCGGACTA
CCTGCCGGCA TGGTGACAGC CGGTGACGTT GCCCGCACGC GGTTCGGGAT GGCGCTGCGT
GGTTACCGGA TGGCCGAGGT CGACGCCGTC CTGCTTCGGC TCGCCGACGA GCTGGCCTGG
CGGGACGAGG AGCTGGCCCG GCGGGACGAG GAGCTGGTCC GGCTGGCCGC CTTCGCGCGC
GTCGACACCG CGCCATCGCC GGACGGGCAT CGGGATACTC GCTCGCCACA GATCGACGAG
TGA
 
Protein sequence
MHRASLPESP RSAGRGTIGC VVLVIEIVIV AAVVFAVAAL AVGRFDRLAP APPDGAPTGL 
PAGMVTAGDV ARTRFGMALR GYRMAEVDAV LLRLADELAW RDEELARRDE ELVRLAAFAR
VDTAPSPDGH RDTRSPQIDE