Gene Francci3_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3834 
Symbol 
ID3905582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4595725 
End bp4596378 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content73% 
IMG OID637881160 
ProductO-methyltransferase family protein 
Protein accessionYP_482913 
Protein GI86742513 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.786829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0117824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA CTGACATCGG CGAACTCGAG TCCGCCGCCG CCTATGCCGA GGGCTTCCTG 
CTGGAAGACC CGATCCTTCG CGCTGCCCGC GCCCGAGCCG AGGAGGTCGG GATCGTCCCG
GTCAGCCCGG GTACCGGCGC GGTCCTACGC TTCCTCGCCG CTGCCGTGGG CGCCCGCGCG
GTGGTCGAGA TCGGCACAGG TACCGGGGTC TCCGGTACCT GGCTGTTGCG CGGGATGCGG
CCCGACGGAA CCCTGACCAC CATCGACGTC GAGGCCGAGC ACCTTCGGCT GGCCCGGCGC
ACCTACGCCG ACGCGGGGAT GACCCCCGGG CGCAGCCGGC TGATCACCGG CCGCGCCCTC
GACGTTCTCC CCCGGCTGAC CGACGGCGCC TATGACCTCG TGTTCTGTGA CGCGGACCGG
CGTGAGGGCA CCGAGTACCT CACCCAGGCC CTGCGGCTGC TGCGGCCGGG CGGCGTGGTG
GCGTTCGCCA GCGTGCTGGC CTTGGCCCAG GGCCAGGCCA CCGGCCCCGA GGCGGTGGCG
GTCCGCGAAC TTGCCACAGC TGTACGTGAC GACGTGCGGC TTACCCAGAT GCTCCTCACC
ACCGGCGGCG GCCTCCTGGT CGCCGTGGTC GCCAAGTCCT CCCCGGTCGG CTGA
 
Protein sequence
MPDTDIGELE SAAAYAEGFL LEDPILRAAR ARAEEVGIVP VSPGTGAVLR FLAAAVGARA 
VVEIGTGTGV SGTWLLRGMR PDGTLTTIDV EAEHLRLARR TYADAGMTPG RSRLITGRAL
DVLPRLTDGA YDLVFCDADR REGTEYLTQA LRLLRPGGVV AFASVLALAQ GQATGPEAVA
VRELATAVRD DVRLTQMLLT TGGGLLVAVV AKSSPVG