| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3824 |
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| Symbol | |
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| ID | 3905572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4584238 |
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| End bp | 4585665 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637881150 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_482903 |
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| Protein GI | 86742503 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0707619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0367563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CCAACCCGGC GGCGACCGGA ATCGGCCTGC CCGCCACCGG CGGCCCGCGG
CTGCCCCAGG AGCCGCGTCT GCACACCGAG ATCCCCGGCC CGCGGTCCCG GGCACTCGCC
GCGCGCCGCG TCGGCGCCGT GGCCCGGGGG GTCGGTGAGA CCCTCCCGGT CTACGCGCAC
GCGGCGGGCG GCGGGGTCGT GGTCGACGTG GACGGCAACT CGCTCATCGA CTTCGGTTCG
GGGATCGCGG TGGTCAGCGT CGGCAACGCT GCGGACGGGG TCGTCGAGGC CGTGCGCGAG
CAGATCGGCC GGTTCACCCA CACCTGCTTC ATGGTGACGC CGTACGAGGG CTATATCGCC
GTCTGTGAGG CGCTGAACCG GCTGACGCCG GGTACCCATG AGAAACGCTC GGCATTGTTC
AACTCCGGAG CGGAGGCCGT CGAGAACGCC GTCAAGATCG CGCGCAGCGC GACCGGCCGG
GGCGCGGTCG TCGTCTTCGA GCACGCTTAC CATGGCCGGA CGAACCTGAC GATGGCGATG
ACCGCGAAGT CGATGCCCTA CAAGAGTGGG TTCGGGCCGT TCGCGCCCGA GGTCTACCGG
ATGCCGCTGG CGTATCCCTA CCGCTGGCCG ACCGGTCCCG ACCGCTGTGG GGAGGAGGCC
GCCGAGCGGG TGATCGAGCT CGTGCGGGAC GAGATCGGGG CCGCGTCCGT CGCCGCGATG
GTCATCGAGC CGATCCAGGG GGAGGGCGGT TTCATCGTCC CCGGGACCGG GTTCCTGCCC
CGCCTCGCCG AGTTCTGTAC GGTCGCGGGG ATCGTGTTCG TCGCGGACGA GGTGCAGACC
GGGTTCGCCC GGACCGGGAC GATGTTCGCC TGCGAGCACG AAGGCGTCGT CCCGGATCTC
ATCACCACCG CCAAGGGCAT CGCCGGCGGC CTGCCGCTCG CGGCCGTCAC CGGCCGTGCG
GAGATCATGG ACGCCCCCCA GGTCGGCGGG CTCGGCGGCA CCTACGGGGG GAACCCGGCG
GCCTGCGCCG CGGCTCTCGC CGCGATCGAC CTCATCGAGT CCGAGGACCT GGCCGGCCGG
GCCCGCCGGA TCGGCGAGAT CGCCCTGCCC CGCCTGCACG CGTTGCGCGA GCGGTACGAC
TTCGTCGGGG ATGTCCGGGG GCGGGGCGCG ATGGTCGCCC TGGAGCTGGT CCGGGGCGCC
GGCGACGACA GCCCGGACAA GGTCCTCACC GCCGCCGCGG CCGCCGCCTG CCATCGTCGC
GGCCTGATCG TGCTCACCGC GGGCACCTGG GGCAACGTGC TCCGGCTGCT GCCACCGCTG
GTGATCGAGG AGCCGTTGCT GCTGGCTGGC CTCGATCTCC TCGACGAGGC GTTCGCGGAG
CTCGCGGCGC GCCGTCAGCC TCCCTCCCCG GCCCGCCCGG AGGGGTGA
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| Protein sequence | MTIPNPAATG IGLPATGGPR LPQEPRLHTE IPGPRSRALA ARRVGAVARG VGETLPVYAH
AAGGGVVVDV DGNSLIDFGS GIAVVSVGNA ADGVVEAVRE QIGRFTHTCF MVTPYEGYIA
VCEALNRLTP GTHEKRSALF NSGAEAVENA VKIARSATGR GAVVVFEHAY HGRTNLTMAM
TAKSMPYKSG FGPFAPEVYR MPLAYPYRWP TGPDRCGEEA AERVIELVRD EIGAASVAAM
VIEPIQGEGG FIVPGTGFLP RLAEFCTVAG IVFVADEVQT GFARTGTMFA CEHEGVVPDL
ITTAKGIAGG LPLAAVTGRA EIMDAPQVGG LGGTYGGNPA ACAAALAAID LIESEDLAGR
ARRIGEIALP RLHALRERYD FVGDVRGRGA MVALELVRGA GDDSPDKVLT AAAAAACHRR
GLIVLTAGTW GNVLRLLPPL VIEEPLLLAG LDLLDEAFAE LAARRQPPSP ARPEG
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