Gene Francci3_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3710 
Symbol 
ID3903811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4444191 
End bp4445021 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content76% 
IMG OID637881036 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_482791 
Protein GI86742391 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGGAG CCAGCAGGCA CGGCTTGGCG GCCGCGCGGG CGACGCTCGA CGAGGCAACC 
GCGACGGCAC CGGGCGCGCC CCGCCCGGTG GACGCCGGGC GGATCGCCGA GGACCTCCGG
GCCGTCGCCG AGCTCCTCGC CCGGGAGCCG GCCGTGCGCC GCGCCCTCAC CGACCCGGGG
GCACCCGTGG CCGCGCGCAC GGAGCTGGTC ACCCGGCTGT TCGGAACTCA GCTCGCCCCG
GCGAGCCTGC GGATCGTGCA CACGGCGGTC GGGGCGCGCT GGTCGCGGCC GTTCGATCTG
CAGTACGCGC TGCTCGAACT GAGCGTCGAG GCGCTGCTCG TCGAGGCGGA GCGGGACGGG
GCGCTGGAGG AGGTCGAGGA CGAGCTGTTC CGGTTCGGCC GGATCCTCGA CCAGAACGCT
CCGCTCGCGC TCGCGCTGAC CGACCCGGCC GCGCCGGCGG CAGTCAAGGA CAGGCTGCTC
ACCCGGCTGC TCGCCGGCCG GGCGCACCCG GTCACCGTGC GCCTGGTCCA GCAGGCGGCG
GCCGACCGGA TCCACGGCGA CGTCGAGCGC CGGCTGGCCG AGTTCAGCCG GATCGCCGCG
GCCCGCCGGG GTCGGGTGGT GGCGATCGTC CGTACGGCGG TTCCGCTGAG TAGCGAAGTC
GTCGCCCGTC TGGGTGCGGC GATCAGCCGG TACTTTGGCC GCCAGATCCA GCTGCAGGTC
GATCTCGACC CCGACATCCT GGGTGGTGTC GTGGTCCAGG TCGGCGGCGA GGTGGTGGAC
GGCAGCGTGC TGCGCCGGTT CGTCGCCGCC CGCCGGGCCC TGCTCCGATA G
 
Protein sequence
MEGASRHGLA AARATLDEAT ATAPGAPRPV DAGRIAEDLR AVAELLAREP AVRRALTDPG 
APVAARTELV TRLFGTQLAP ASLRIVHTAV GARWSRPFDL QYALLELSVE ALLVEAERDG
ALEEVEDELF RFGRILDQNA PLALALTDPA APAAVKDRLL TRLLAGRAHP VTVRLVQQAA
ADRIHGDVER RLAEFSRIAA ARRGRVVAIV RTAVPLSSEV VARLGAAISR YFGRQIQLQV
DLDPDILGGV VVQVGGEVVD GSVLRRFVAA RRALLR