| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3673 |
|---|
| Symbol | |
|---|
| ID | 3905357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4404196 |
|---|
| End bp | 4405866 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880999 |
|---|
| Product | heat shock protein 70 |
|---|
| Protein accession | YP_482754 |
|---|
| Protein GI | 86742354 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.192305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.510271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGGCA CCAAGGTGTT CGGGATCGAC CTGGGCACGA CCTACTCCTG CATTGCCCAG
GTCGACGAGT ACGGCCGACC GGAAGTGATC CGCAACATCG AGTCCCAGCC GACGACGCCT
TCGGTCGTCC TGTTCGACAC TGGGGCGGAG GGCCCAACCT CTTTCGTGGT GGGAACCCAG
GCCAAGCGCC AGGCTCGCAT CCGTCCCGAC GATGTCGCCC GGCTGGTCAA GCGGCACATG
GGCGCGTCGG ACTGGCGGTT CGTGGCGCAT GACGAGGAGT ACAGCGCCGC CGCGGTGTCG
AGCCTGGTGC TCAAGGCGCT CGCTGCGGAC GCCGAACGCG CGACCAGTGT CCCGGTCACC
GATGTAGTGA TCACCGTGCC CGCGTACTTC GGTGACGAGG AGCGCAAGGC GACGAAGCTG
GCCGGCGAGC TCGCCGGCCT CAACGTGGTC GACATCATCA ACGAGCCGAC CGCCGCCGCC
TTCGCCTACG GATTCGGCCA GGACGGGGCC GAGGAGTCGA CCGTGCTGGT CTACGACCTC
GGCGGTGGCA CATTCGACAC CACGGTCATC AGGCTGAGCG AGGGCGCGAT CACCGTGGTC
GCCACGGATG GCGACCACGA GCTGGGCGGT GCGGACTGGG ACAACGAACT CGTCCGCTAC
CTGGCGCAGA AGTTCACCGA GGCGCAGCCC GACGCGGGCG ACCCGCTCGA CGACGTCTAC
GACGAGCAGG AGCTGCTGGC CGCGGCCGAG GACGCGAAGC TGGCGTTGTC CGGCCGGGAC
AGCGTCGACG TGCTGGTCGT GCACAACGGC AGGCGCACAA GCGTGCCGGT GACCCGGACC
GTCTTCGAGG AGATCACCGG CCCGCTGCTG CGGCGCACCA TCGACCTGAC CGGCTCGGTG
CTGGCGCGAG CCCGGGAGAA GGGTGTCGAG AAGATCGACT TGTGCCTGCT GGTGGGGGGC
ATGAGCAAGA CACCGGCGGT GGCCCGCCGG CTGCAGGAGT CCTTCGGGCT CACCTCTCGG
CTTGCCGATC CCGATCTCGC CGTCGCCAAG GGCGCCGCGG TGTACGGGCA GAAGAAGGCA
CTGGAGCGCG AGGTCCACGC GGACCTGGTC GCCAGCGGGC ATCTACGTCC CGACCAGGAA
CTCGCCGCAG CCGACGCCGT GGACGTGGAG AAGGCGGCCG CAGCCAGCGC CGAGGAGGCG
GGACTCTCGA CCGCCTCCGT GGTCGATCTC GTCCGCACGA AAGTGACGAA CGTCACGTCA
CGTGGCTTCG GGATCTTCGC CGAGGACCGG GGCACACCGG TCGCGGCCTT CCTCGCCCAC
CAGAACGACC CGCTGCCTAT CGCCGTCACC CGGACCTTCT ACACCGTCGT CGACGATCAG
GCCGAGGTGG ACATCCGGGT CTTCGAGCAG GGCACCACCG CCGAGTCCAC GGCGATCGAC
GACAACAAGG TGATCGTCGC CGGCTCCATC AGCGGGATTC CGCCTGGCCA CCCGTTGGGC
ACCCCCGTTG AGGTGACCTT CACGATGGGC GGGGACCAGA CGATCCAGGT CACCGCCTCG
CACGAGGGCG CGGCCACCCC CTTGGTGCTC GAGGTGCGCG CCGGGGTCGG CTCGGAGGAG
ATGCGGGCCG TCGAGTCGGC GAAGGTCAGC CTGCTCAAGC AGCGGGACTG A
|
|---|
| Protein sequence | MAGTKVFGID LGTTYSCIAQ VDEYGRPEVI RNIESQPTTP SVVLFDTGAE GPTSFVVGTQ
AKRQARIRPD DVARLVKRHM GASDWRFVAH DEEYSAAAVS SLVLKALAAD AERATSVPVT
DVVITVPAYF GDEERKATKL AGELAGLNVV DIINEPTAAA FAYGFGQDGA EESTVLVYDL
GGGTFDTTVI RLSEGAITVV ATDGDHELGG ADWDNELVRY LAQKFTEAQP DAGDPLDDVY
DEQELLAAAE DAKLALSGRD SVDVLVVHNG RRTSVPVTRT VFEEITGPLL RRTIDLTGSV
LARAREKGVE KIDLCLLVGG MSKTPAVARR LQESFGLTSR LADPDLAVAK GAAVYGQKKA
LEREVHADLV ASGHLRPDQE LAAADAVDVE KAAAASAEEA GLSTASVVDL VRTKVTNVTS
RGFGIFAEDR GTPVAAFLAH QNDPLPIAVT RTFYTVVDDQ AEVDIRVFEQ GTTAESTAID
DNKVIVAGSI SGIPPGHPLG TPVEVTFTMG GDQTIQVTAS HEGAATPLVL EVRAGVGSEE
MRAVESAKVS LLKQRD
|
|---|
| |