| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3649 |
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| Symbol | mnmA |
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| ID | 3905330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4359105 |
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| End bp | 4360163 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880972 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_482730 |
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| Protein GI | 86742330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTGC TCGCCGCGAT GTCCGGCGGG GTCGACTCCG CCGTCGCCGC CGCCCGGGCG
GTTGACGCCG GTCACGACGT CACCGGGGTG CATCTGGCGT TGTCGCGCTC GCCGGAGTCG
GACCGGACCG GAGCCCGCGG CTGCTGCACC ATCGAGGACG CCCGGGACGC CCGGCGGGCC
GCCGATATCC TCGGCATCCC GTTCTACGTC TGGGATCTCG CGGACCGGTT CGAGACCGAC
GTCATCGAGG AGTTCGTCGA GTCCTACGCG GCCGGTCGCA CGCCCAACCC CTGCGTGCGC
TGCAACGAGC GCATCAAGTT CGCGGCCGTA CTCGACAAGG CCCTCGCGCT CGGCTTCGAG
GCCGTCGTCA CCGGGCACCA CGCCCGGCTC GATCCGGACG GCACCCTGCG CCGCTCGGTG
GATCCGGACA AGGACCAGTC CTACGTCCTG GGAACGCTGC GTCCCGAGCA GCTCGCCGCC
GCGCGGTTCC CGCTCGGGGA TTCCACCAAG GCCCAGGTGC GGGTAGAGGC GGCCGAGCGT
CGCCTTGCCG TTGCGGACAA GCCGGACAGC CACGACATCT GTTTCATCTC GCACGGGGAC
ACCGGTGGCT GGTTGCGCGA GCGGCTCGGC CCGCGGCCGG GTCCGGTCAT CGATGCGACG
ACCGGGCAGA CGCTCGGGCA CCATGACGGC GCCTACGCCT TCACCGTGGG TCAGCGTCGC
GGGCTGAAGC TCGGGCGGCC GGCCGCGGAC GGCCGGCCGC GCTATGTGCT GGACATCTCC
CCGGTGACGT CGACGGTCAC CGTCGGACCG GCCGAGGCGC TCGACGTGCG CCGGCTCGTG
GCGGACCGGG CCGTCTGGCC GCACGAGGGG GCCGTGTCAT GCCTGGCCCA GGTGCGGGCG
CACGGCGGGG TGGTACCGGC GGTGGCGCAG GCGCGCGACG AGGAGCTCGT CGTGACGCTG
ACGACGCCGG TCCGCGGCAC GGCCGCAGGC CAGGCAGTGG TGCTGTACGA CGGTGACCGG
GTGCTTGGCG GAGGGCACAT CCGCACCACC GGTGGTTAG
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| Protein sequence | MRVLAAMSGG VDSAVAAARA VDAGHDVTGV HLALSRSPES DRTGARGCCT IEDARDARRA
ADILGIPFYV WDLADRFETD VIEEFVESYA AGRTPNPCVR CNERIKFAAV LDKALALGFE
AVVTGHHARL DPDGTLRRSV DPDKDQSYVL GTLRPEQLAA ARFPLGDSTK AQVRVEAAER
RLAVADKPDS HDICFISHGD TGGWLRERLG PRPGPVIDAT TGQTLGHHDG AYAFTVGQRR
GLKLGRPAAD GRPRYVLDIS PVTSTVTVGP AEALDVRRLV ADRAVWPHEG AVSCLAQVRA
HGGVVPAVAQ ARDEELVVTL TTPVRGTAAG QAVVLYDGDR VLGGGHIRTT GG
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