| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3575 |
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| Symbol | |
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| ID | 3904514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4273329 |
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| End bp | 4274609 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880896 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_482656 |
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| Protein GI | 86742256 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAA CAGGGCGGCG TCGAGCGGTC GGTGGGCCTG AGAGAATAGG TGACGTGGTG
GAGGCTTCGA TCCTGCGTGA GGTTGTCCTG CTCGGGTCCA CCGGTTCGAT CGGAACCCAG
GCAATAGATG TCGTACGCCG CAACCCGCAG CGGTTCCGGG TGGTGGCGTT GATGGGCGGC
GGGTCCCGGG TGGACCTGCT CGCCGCTCAG GCACTGGACC TCGGCGTCCA GGCCGTGGGA
GTGGCGGCGG CCTCGGCCGC TCAGGACCTC CAGCTGGCCT TCTTCGCCGA GGCGTCGCGG
CGTGGCTACC GTCGGGGTGA GTTCCCCGTG CCAAAGATTC TCGCCGGTCC CGACGCCGCG
AGCGAGATCG CGGCGTGGCC ATGCGACATC GTCCTCAACG GCATCACCGG CTCGGTCGGG
TTGGCCCCGA CGCTCGCGGC GCTGGCCGCC GGCCGGACTG TGGCGTTGGC GAACAAGGAA
TCGTTGGTCG CCGGGGGGCC GTTGGTGCTC GACGCGCTCG GTGGCGACCC CGACCGCCTG
GTGCCGGTGG ATTCCGAGCA CTCCGCACTG GCGCAGTGCC TGCGTGGCGG GCGGCGGGAC
GAGGTACGCA AACTGGTGTT GACCGCCAGC GGAGGTCCCT TCCGCGGGCG CCGCCGCGAC
GAGCTTGCCG CCGTTACCCC GGAGCAGGCG TTGGCCCATC CCACCTGGGA CATGGGACCC
CTGGTGACGA TCAACTCGGC GACCCTGATG AACAAGGGGC TTGAGCTGAT CGAGGCGCAC
CTGTTCTTCG GGGTTCCCTA CGACGACATC GAGGTCGTCG TGCACCCCCA GTCGTTGGTG
CACTCGATGG TCGAGTTCAC CGACGGCTCG ACGATCGCTC AGGTCTCCCC ACCGGACATG
CGACTGCCCA TCGCGCTGGC GCTCGGCTGG CCGGACCGGG TGGCGCAGGC ACAGCCGCCG
ATGGACTGGT CGCGGGCGCA GGCGCTTACC TTCGAACCGC TGGACGAGGT GGCGTTCCCG
GCGGTGGAGC TCGCGCGCAC AGCCGGGCGG CGCGGCGGCA CCGCCCCCGC GGTCTTCAAC
GCCGCGAACG AGGAGGCGGT GGCGGCCTTC CTCGCCGGGC GGCTGCCCTT CATCCGTATC
GTCGACCTGG TGGCCGAGGT CATCGCCGAG CACGAAGTGA TCGATCATCC CACGGTGGAG
GAGGTGTTCG CCACCGAACG AGCCGCGCGG GCGGCGGCAG GGCGGCTGAT CCGGCGCGAG
ACCGAACGGG ACACGGTATG A
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| Protein sequence | MNRTGRRRAV GGPERIGDVV EASILREVVL LGSTGSIGTQ AIDVVRRNPQ RFRVVALMGG
GSRVDLLAAQ ALDLGVQAVG VAAASAAQDL QLAFFAEASR RGYRRGEFPV PKILAGPDAA
SEIAAWPCDI VLNGITGSVG LAPTLAALAA GRTVALANKE SLVAGGPLVL DALGGDPDRL
VPVDSEHSAL AQCLRGGRRD EVRKLVLTAS GGPFRGRRRD ELAAVTPEQA LAHPTWDMGP
LVTINSATLM NKGLELIEAH LFFGVPYDDI EVVVHPQSLV HSMVEFTDGS TIAQVSPPDM
RLPIALALGW PDRVAQAQPP MDWSRAQALT FEPLDEVAFP AVELARTAGR RGGTAPAVFN
AANEEAVAAF LAGRLPFIRI VDLVAEVIAE HEVIDHPTVE EVFATERAAR AAAGRLIRRE
TERDTV
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