Gene Francci3_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3565 
Symbol 
ID3904504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4263682 
End bp4264488 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content73% 
IMG OID637880886 
Producthypothetical protein 
Protein accessionYP_482646 
Protein GI86742246 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00347083 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCGG CGGATGATCA GGCATCGCGG ATGCGGGAAG GGACGGTCGA AGTGGTAGGG 
GCGGGGGAGG CCGGCCGCGC GCGTGACCGG AGCCCATCCG GATCGGCCCG CGGGCGCGGC
GGCGTTCGGA CGGCGCTGCG GGCTCGGCTG GCGGCTGGCC TCGCCGACGC GGGCTTCGAT
CTCGAGGATG TGACGGTCAC ACGGGCCGGA TCGCGCAGCG TGGTGCGGGT GGTGGTGGAC
CGCGACGGAG GAGTCGACCT GGACGCGGTC GCGGACGCCA GCCGGCTCGC CTCCGAGCTG
CTTGACGCCG CCGAGACCGA CGGCCAGGGC CTGGTCGCCG GGCCTTATGT TCTCGAGGTC
ACCTCACCGG GCGTCGAACG GCCGCTGACC GAGCCTCGGC ACTGGCGCCG CGCGATCGGC
AGGCTTGTCA CGGTACGTGA TCGAGACGGC ATCGTCCTCG CCGGGCGTGT CCTGTCCGCC
GACGAATCGG GGGCGGATCT GGCGGTGGCG ACGGATCCCG CGCGGCCCGG ACGCCCCCCG
CGTCGGCGGC TCGCGCGGGT GACCTTCGCA CAGGTGGCCC GGGCTACCGT CGAGGTCGAG
TTCTCGGCCG AGGCGTATGA TGATCTTTCT ATCGAGTCGG TGGAGACGCC GTCTTTGTCC
GCCGTGTTGG TGGAACCCGG CGAGACAGCC GATCTCGGGT ACGGAGAGCC GGACGACGAT
CTTCCGGCGG CGCCGGGGAG GGAATCCAAT GACGACGGCC GGGAGGCCGG CCCCCGGGGC
GCGGCCGGTA AGGAGATGAC CCGGTGA
 
Protein sequence
MGSADDQASR MREGTVEVVG AGEAGRARDR SPSGSARGRG GVRTALRARL AAGLADAGFD 
LEDVTVTRAG SRSVVRVVVD RDGGVDLDAV ADASRLASEL LDAAETDGQG LVAGPYVLEV
TSPGVERPLT EPRHWRRAIG RLVTVRDRDG IVLAGRVLSA DESGADLAVA TDPARPGRPP
RRRLARVTFA QVARATVEVE FSAEAYDDLS IESVETPSLS AVLVEPGETA DLGYGEPDDD
LPAAPGRESN DDGREAGPRG AAGKEMTR