Gene Francci3_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3530 
Symbol 
ID3904469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4218445 
End bp4219566 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID637880851 
Producthypothetical protein 
Protein accessionYP_482611 
Protein GI86742211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.212487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCAG GTACTCGACC GGTGGCGGCG CCGCTGGGAC TGCGCTGGGA CTGCCCTGAC 
GTGGTCGAGC TCCGCGACGC GGACCGCACG CTGCGCCTCA CCCTCAACGA GCCCGCCCAC
GCCACCCTCC TGCACGCCCA CCTCAAACGG CACGGCCAGG CGATCCTGTA CGCGGCCACC
CCGGCGGCCG ACTACGGGTG GATCGACGGC CACGCCCACG AAATCGCGCT GCCCCCGGTC
ACCATCTGCC CCGCTGCACC CGGCCCGCTG CACGGCCTCC TACCCGTCGT GACGAACACA
CACGGGCACC TGCCCGGCGC CCCGGACGCC ACCTGGCTCT CGGCGAAGCT GTTCACCCAT
CCCGAACGGA TCGGCGAGAT CGTCGCCGAG GCGCTTCCCG GCCTGCTGGC CACGCTCGAC
ACACCCGCGT GCTGGTGGCT GCGATACCGC AGCCGACAGG AGACAGACCA CCTGCGCCTG
CGGCTGCGCA CTACCCCCGA CTGTTATGCG CAGTACTCGA ACGCGGTCGG GGAGTGGGCG
CAGCGGATGC GCCAAGCAGG ACTGGCCGGG CGGCTGGTGA TCGACACCTA CTCCCCGGAA
GTCGGCCGCT ACGGGCATGG CGAGGCACTG GACGCCGCGG AGAACGTCTT CGCCGCCGAC
TCCGCCACCA TGGCCGCCCT GCTGCGGCAC CAGCCCACCA CCGAGGTCGA CCTCGGGCTG
GTGGTGGCGA ACATGGTAGG CATCGTCAGC GGGTTCTTCG GCGATCCCAA CGAGGCGATG
GACTGGCTGG CCGCCCGGCC GGCCCCGGCT GCCGCTGCGG CCCTCGACCG GGCGGTGGCC
GAGCGAGCGA CCCAGCTCGC CACCGACCCG GCCGGGCTGT GGTCGCTGTC CGGCTGGACC
ATCGACATCG GGCCGGCGTG GGACAACCGC GCCGACGCGC TGGCCAGCTA CCACAAGGCG
CTGCCACCGG AGGCGAACAC CGACGTGGTG CCGGAGTCGC TGCTGCACAT GCACCACAAC
CGGGCCGTCG GCATCAACCG GGACAGCGAA CGCACCTGCC GCCGCCTGGC CCGGCAAGCC
GCGCTCACCT GGCGAGCCCG CCGTAGCAGT GGTGCCCGGT GA
 
Protein sequence
MEAGTRPVAA PLGLRWDCPD VVELRDADRT LRLTLNEPAH ATLLHAHLKR HGQAILYAAT 
PAADYGWIDG HAHEIALPPV TICPAAPGPL HGLLPVVTNT HGHLPGAPDA TWLSAKLFTH
PERIGEIVAE ALPGLLATLD TPACWWLRYR SRQETDHLRL RLRTTPDCYA QYSNAVGEWA
QRMRQAGLAG RLVIDTYSPE VGRYGHGEAL DAAENVFAAD SATMAALLRH QPTTEVDLGL
VVANMVGIVS GFFGDPNEAM DWLAARPAPA AAAALDRAVA ERATQLATDP AGLWSLSGWT
IDIGPAWDNR ADALASYHKA LPPEANTDVV PESLLHMHHN RAVGINRDSE RTCRRLARQA
ALTWRARRSS GAR