Gene Francci3_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3397 
Symbol 
ID3905979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4028579 
End bp4028914 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content68% 
IMG OID637880719 
Productputative regulatory protein 
Protein accessionYP_482480 
Protein GI86742080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0132662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.918099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTA TCCCGGTGAA CGAATCGCTG TTGGAAAACG TCGTCGCGGT CAGCGGCGCG 
ATGCCGGAAA CGGATCTGGA CGGCAAGCAG AAGGCGAACC GTGACGGCCT GCCGGTCTAC
GGGGTGCAGG TCGCGGTCAC CTACGACGGC ACCGCATCTG TGATCAAGGT GAAGGTGGCG
GGTGAGGCAC CGCGGGTGCA GGTCGGGATG CCGGTCACCC TGGTCGGCCT GATCGGTACG
CAGTGGGCGA TCGGCGAGCG GCACGGGATC TCCTGGAGCG CACAGGCGAT CCGTCCGCTT
CCCACCCCGA ACCCGGCCCC GGCGTCGAAG AGCTGA
 
Protein sequence
MRAIPVNESL LENVVAVSGA MPETDLDGKQ KANRDGLPVY GVQVAVTYDG TASVIKVKVA 
GEAPRVQVGM PVTLVGLIGT QWAIGERHGI SWSAQAIRPL PTPNPAPASK S