Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3320 |
Symbol | |
ID | 3904106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3934761 |
End bp | 3935546 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637880645 |
Product | putative hydrolase |
Protein accession | YP_482406 |
Protein GI | 86742006 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.859437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.797481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGGG TGGAGCTGAC GTCGATCGAT GGAGTACGGC TGGAGGGCGC GGTGCATGCA GCCGTCGGAG GACAGCACCG GGGGGTGGTC ATCCAGCTAC ATGGAATCAA CGCAAACATG ACCGAGGGCG GCATGTTCGT CCGACTCGCT GATCGACTTG CACACGCCGG CTTTCATGTT TTGCGGTTCT CCTTCCGCGG CCACGGGGGA AGCGGAGGGA CCCAGCGTGG CGTGACGATC GCCGGCGAGC TGCTCGACCT CCAGGCCGCG GTCGAGTACG CGGAGGAGCA GTTGCCAGGT CGCCTGTCGA TCGTGGCGTC GAGCTTCGGA GCGGTATCGG CCTCGCTCTC GCTGCCCTGG TTGGCCGACC GCCTGAACAG GCTCGTCCTG TGGAATCCGG TACTCGACCT CCGGCGGACA TTCCTGACAC CGGAACTGCC GTGGGGACGA GAGAACTTCG GCCCCGATCA GCAGAAGCTG CTGTCAGGTC AGGGGTTCCT GGTGCTCGAC GGGGAGTTCG AGGTCGGCCG GGTGCTGTTC GACGAGTTTG ATCACTATCG GCCGCTGGAC TCCCTGATGG CGACCGCTGC ACCGGCGCTC GTGGTACACG GCGATCGGGA CACCGCGGTC TCGTACGAGA TCGCGTGGCA GGCAGCCTGC GCCAGACCCC ACACCGAGTT TCACACCGTC GAAGGTTCGG ATCACGGCTT CGACACCCGA GAACGAGAGG ACGAGGCAGT CGCAGTCACA GTGAGGTGGC TCGTTGGCGA CAAGGGCCGA GCATGA
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Protein sequence | MQRVELTSID GVRLEGAVHA AVGGQHRGVV IQLHGINANM TEGGMFVRLA DRLAHAGFHV LRFSFRGHGG SGGTQRGVTI AGELLDLQAA VEYAEEQLPG RLSIVASSFG AVSASLSLPW LADRLNRLVL WNPVLDLRRT FLTPELPWGR ENFGPDQQKL LSGQGFLVLD GEFEVGRVLF DEFDHYRPLD SLMATAAPAL VVHGDRDTAV SYEIAWQAAC ARPHTEFHTV EGSDHGFDTR EREDEAVAVT VRWLVGDKGR A
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