Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3294 |
Symbol | |
ID | 3904080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3900465 |
End bp | 3900860 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880619 |
Product | 6-phosphogluconate dehydrogenase, NAD-binding |
Protein accession | YP_482380 |
Protein GI | 86741980 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0771524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCT GTACGACCTT CCTGGGCTTG GGCGCGATGG GCAGCGCGCT CGCCGCCGCG ACTCTCGACG CCGGCCGACC AACCGTGGTG TGGAACCACA CTCCAGGCAG AGCACGGGCT CTCGGCGATC GTGGCGCCAC CGTCGCCGAG ACCGTCGAGG AGGCGATCAT CGGCGGCGGG GTGGTCGTCG CCTGCCTGCT TGACCATCGG TCGGTGCACT CTGTGGTCGA GTTCACCGAA GCCGCGCTGG AATCGCTGGT GACGGCCAGC CTGGACCAGG GCGTCAATGT CGAGGTGCTG CGGCCCGTCC ACGACATCGT GCGCCGGCAG ATTACCGCCG GATACGGCCA GCAGGGCACC GCCCGCATCT TCGAAGAGCT CAGGAGCTCC CGATGA
|
Protein sequence | MTTCTTFLGL GAMGSALAAA TLDAGRPTVV WNHTPGRARA LGDRGATVAE TVEEAIIGGG VVVACLLDHR SVHSVVEFTE AALESLVTAS LDQGVNVEVL RPVHDIVRRQ ITAGYGQQGT ARIFEELRSS R
|
| |