Gene Francci3_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3294 
Symbol 
ID3904080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3900465 
End bp3900860 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content68% 
IMG OID637880619 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_482380 
Protein GI86741980 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0771524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT GTACGACCTT CCTGGGCTTG GGCGCGATGG GCAGCGCGCT CGCCGCCGCG 
ACTCTCGACG CCGGCCGACC AACCGTGGTG TGGAACCACA CTCCAGGCAG AGCACGGGCT
CTCGGCGATC GTGGCGCCAC CGTCGCCGAG ACCGTCGAGG AGGCGATCAT CGGCGGCGGG
GTGGTCGTCG CCTGCCTGCT TGACCATCGG TCGGTGCACT CTGTGGTCGA GTTCACCGAA
GCCGCGCTGG AATCGCTGGT GACGGCCAGC CTGGACCAGG GCGTCAATGT CGAGGTGCTG
CGGCCCGTCC ACGACATCGT GCGCCGGCAG ATTACCGCCG GATACGGCCA GCAGGGCACC
GCCCGCATCT TCGAAGAGCT CAGGAGCTCC CGATGA
 
Protein sequence
MTTCTTFLGL GAMGSALAAA TLDAGRPTVV WNHTPGRARA LGDRGATVAE TVEEAIIGGG 
VVVACLLDHR SVHSVVEFTE AALESLVTAS LDQGVNVEVL RPVHDIVRRQ ITAGYGQQGT
ARIFEELRSS R