Gene Francci3_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3243 
Symbol 
ID3904414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3837648 
End bp3838361 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content74% 
IMG OID637880568 
Productphosphoglycerate mutase 
Protein accessionYP_482329 
Protein GI86741929 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.369324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCGG TGCGGCTGGC CCTGGTTAGT TGCGCGCCGA CCGTGGCCCT GCGGGCCGCC 
CGGTTCCCTA TCGACGAGCC TCTCGACGCC GACGGGCTGC ACCGAGCCGC CGGCGCCGCC
GAGGCGGTAG CGGCTGGCGC GCTTCCCGCG ACGGGACGGG TGCTCTGCGA CGGATCCGCG
CGGGCCTGTC AGACCGCCGC CGCCCTGGGC CTCGGTGCCC GCAAGGGTGA CGTCACCATC
CCGCGGGCCC CGGGCCTACC CGTCGTCCCC GAGGTGGATC CGGCCCTGCG CGACCTGGAC
GTCGGGGCCT GGCGGGGGCG CAGCCTGGAC GAGATTCCCC CGGACGAGCT GCGCCGGTGG
CACAGCGATC CGGCGGTGGC CCCGCCGGGC GGCGAATCCC TACTGAGCTT GCTCAGCCGC
GTCGAGAACT GGCTGGTCCG GCGAAGCACC GAACCGAGCC ACATCATCGC GGTGACCCAT
CCGGCGGTCA TCCGGGGCGT GCTCGTGGCC GCCCTGCGCT GCCCGGTCGA GATGTTCTGG
CGGATCGACG TCGCCCCGTT GACGGCGACC CTCCTGCACC ATCGGATCGG CGCGGGCGGT
CATGACGGCA CGACCGGCAC GCAGCCGAAA ACGGAGAGTG CCGCGACCAG GACCGCGACC
GGAACCGGAA CCGGAACCGA CTGGACCTTG ACACACGTCT GCCGCCCGCT TTAG
 
Protein sequence
MPPVRLALVS CAPTVALRAA RFPIDEPLDA DGLHRAAGAA EAVAAGALPA TGRVLCDGSA 
RACQTAAALG LGARKGDVTI PRAPGLPVVP EVDPALRDLD VGAWRGRSLD EIPPDELRRW
HSDPAVAPPG GESLLSLLSR VENWLVRRST EPSHIIAVTH PAVIRGVLVA ALRCPVEMFW
RIDVAPLTAT LLHHRIGAGG HDGTTGTQPK TESAATRTAT GTGTGTDWTL THVCRPL