| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3206 |
|---|
| Symbol | |
|---|
| ID | 3906172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3798981 |
|---|
| End bp | 3799544 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637880530 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_482292 |
|---|
| Protein GI | 86741892 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0890237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACCA CCAACGACCT GAAGAACGGC ATGACGCTCG ACATCGACGG GGTGTTGTGG
AACGTCGTCG GCTTCCAGCA CGTCAAGCCG GGTAAGGGTG GGGCGTTCGT CCGCACGACC
CTGAAGAACG TGCTCACCGG GAAGGTCGTC GACCGCACCT TCAACGCCGG GGTCAAGGTT
GACGTCGCGA CCGTCGACCG CCGCGAGATG ACCTACCTCT ACCGGGACGG TGCCGATTTC
GTCTTCATGG ACAGCGAGTC CTACGATCAG ATCCCGATCC CGCCGGATGT CGTCGGTGGG
ACGGCCGACT ACATGCTGGA AAACACCGTG GCCACCGTCG CGCTACATGA CGGCGCCCCG
CTCTATGTCG AACTGCCGGC CAGCGTCGAG CTGACCATTT CGCAGACCGA CCCGGGGGTG
CAGGGCGATC GCTCGACCGG CGGGACGAAG CCGGCCACCC TGGAGACGGG CGCCACCATC
AACGTGCCGC TGTTCATCAC CAGTGGGGAA AAGGTCAAGG TCGACACGCG TGACGGCCGG
TACCTGGGCC GGGTGACGAG CTGA
|
|---|
| Protein sequence | MATTNDLKNG MTLDIDGVLW NVVGFQHVKP GKGGAFVRTT LKNVLTGKVV DRTFNAGVKV
DVATVDRREM TYLYRDGADF VFMDSESYDQ IPIPPDVVGG TADYMLENTV ATVALHDGAP
LYVELPASVE LTISQTDPGV QGDRSTGGTK PATLETGATI NVPLFITSGE KVKVDTRDGR
YLGRVTS
|
|---|
| |