| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3200 |
|---|
| Symbol | |
|---|
| ID | 3906166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3793397 |
|---|
| End bp | 3794452 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637880524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482286 |
|---|
| Protein GI | 86741886 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00811968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTT CGCGCGCCGC CCTGTCGGCC GCCGGGCCCG CCGTCGCCCT GGACCGGGCG
CCGGATCGCC TGGGGCTGCA CCTGCTTCTC CTGCTTGGCC TGTTGCTGGT GTTCGTCGCG
GCGGTCGGTT CGATGCGACG GGCGTGGCGC AACCGGGCCG AGCGTCAGGA GGAGGACCTT
CCCGAGCTGC CCGTCCCGCC GGCGGAACCA GGCACGGTGT TCGCCGCTCC GCTGCGCGGG
ATGTACCTCG GCACCGTCGA CGCCGGGCAC TGGCTGGAAT GGATCGCCGC CCGCGGGCTG
GGCGGGCGGG CCGGCGGCTA CGTCAGCGTG TACGAGACCG GGGTGCGGGT GGACCGCCCC
GGCGAGGCGT TCTGGATCCC GCGCGAGGCC GTCCGCGGTG CCCGCCTGGA GCGGGCGCAC
GCCGGCAAGG TCTCCGCCCC CGGGCGTCTG ATCGTCATCG CGTGGTCGTT CGGCGGGCAC
GAGTTGGAGA CCGGTTTCCG CGGTGAGGAC CGTGCCCGCC AGCCCAAGGT GGTGCGCGCC
GTCCACGACC TGATCGGCCC CCCGCCCGCG CATCTGGCAC CGGGCGACGT CACCTCGCCG
CACGCGGTAC CGCGGATCCG CCCGCGGATC CGGCCCCGGG CCGTCGCGCC CGGCCCCGGG
CCGGTGGGCC GGTCCGGGCA GCGGCCGGGT TCCGGACAAC CGACCGAGGA GATGCCGGCG
ATCCGGACCG GCCCTCGGCT GCGTTCCCGG GGGGAGCGGG CCCAGGCCCG CGGCGAGCGG
GCGGTGCCCG CCGACCGGCG GCTCTACGCG GAGCGGTGGC GCTCGGACCA GCGACTCCCC
GATCGGCGAC ACCAGGATGA GGGTCACCCC GACCCGCGCC GCTCCGACCC GCGCCACCCC
GAGCGGCGTC ATCCCGATCA GTGGCCGGCG GATCCGGAAT CGGACCCCGG GTGGGTGGAC
CCGGAACAGC TTGATCAGTC TGACCCCGGC TGGTCGTCGG TCGACCCGTT GACCTCACCG
CTCGGTGAGG TCAACAGGCT GAAGGAGGAT CGGTGA
|
|---|
| Protein sequence | MTVSRAALSA AGPAVALDRA PDRLGLHLLL LLGLLLVFVA AVGSMRRAWR NRAERQEEDL
PELPVPPAEP GTVFAAPLRG MYLGTVDAGH WLEWIAARGL GGRAGGYVSV YETGVRVDRP
GEAFWIPREA VRGARLERAH AGKVSAPGRL IVIAWSFGGH ELETGFRGED RARQPKVVRA
VHDLIGPPPA HLAPGDVTSP HAVPRIRPRI RPRAVAPGPG PVGRSGQRPG SGQPTEEMPA
IRTGPRLRSR GERAQARGER AVPADRRLYA ERWRSDQRLP DRRHQDEGHP DPRRSDPRHP
ERRHPDQWPA DPESDPGWVD PEQLDQSDPG WSSVDPLTSP LGEVNRLKED R
|
|---|
| |