Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3140 |
Symbol | |
ID | 3903937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3713276 |
End bp | 3714142 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880461 |
Product | hypothetical protein |
Protein accession | YP_482226 |
Protein GI | 86741826 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTGA AGAAGAAGCC GACGGACGCC CCGGGGCCGG CGGCCCCTGG GGCGGCGGGG AAGGACCAGT CGGCGGGCGC AGCCGACAAG AACGGCGCGG CTGGCAGACG CGGCACCAAT CCTGGCGCCG CGGGGAAGAC CCCCGGTGCG GCCGGCAAGG GTGGCGCGGC CGGTCGGAAC GGCCGCAGCG GCGAGGCGGG ACCGGGAAAG GGATTCACCA CTCGGGTCGC CCAACTCCGG ATGATCTACA AGGTCACCCG GCAACGCGAT CCCCGGGCGC TCTGGATCAC CCTGGCGGGC TTCCTCGCTC CGGTCGCCGT CGGCATTGTG CCCGCAATCT TCGTCGGTCC GCTGTACCTG TGGATTCCGA TCGCCCTTCT GCTCGGGGTG GTCGTCTCCC TGAACCTGTT CAGCCGGCGG GTGCAGCGGA CCGCCTACGC CGAGATGGAA GGCAAACCGG GCGCCGCCGC CGGAGTGATC GAACGGATGC GGGGAGAGTG GCGCCTCACC CCCGCCGTCG GCGTCAACCG GCATCAGGAT GTGGTGCACC GTGTCGTCTG CCGGGCCGGG GTCGTGATCA TCGCGGAGGG TCACGGGCGT GGCCCGCGGG AACTGCTCGC CGCCGAGAAG CGCCGGATCC GCAAGGCGGT CGGCGACACG CCGGTGACCG ACATCATCAT CGGTACCAGT GAGGGGGAGA CTCCCCTACC CAAGCTGCAG AGCACCCTGA TGCGGCTGCG GCGCACCCTG CGCCGCAGCG AGGTCGATGC CCTTGACCGT CGCCTGCGGG CGATGGGCGG CGCGGCGCTG CCGATCCCGA AGGGACCGAT CCCCCGCAAC ATCCCGCGCG GCGGCCGCAT CCGATAG
|
Protein sequence | MALKKKPTDA PGPAAPGAAG KDQSAGAADK NGAAGRRGTN PGAAGKTPGA AGKGGAAGRN GRSGEAGPGK GFTTRVAQLR MIYKVTRQRD PRALWITLAG FLAPVAVGIV PAIFVGPLYL WIPIALLLGV VVSLNLFSRR VQRTAYAEME GKPGAAAGVI ERMRGEWRLT PAVGVNRHQD VVHRVVCRAG VVIIAEGHGR GPRELLAAEK RRIRKAVGDT PVTDIIIGTS EGETPLPKLQ STLMRLRRTL RRSEVDALDR RLRAMGGAAL PIPKGPIPRN IPRGGRIR
|
| |