Gene Francci3_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3129 
Symbol 
ID3903926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3698955 
End bp3700478 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content74% 
IMG OID637880450 
Productadenosylcobinamide kinase 
Protein accessionYP_482215 
Protein GI86741815 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III
[COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.654981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA CGCTGCTCGG CACCGGCTCG GCGGACGGCT GGCCCAACCC GTGGTGCGAC 
TGCGCATCCT GTGCCTGGGC CAGGGAACAC GAAGTACGCG GGCAGACGGC CGTTCTGATC
GACGACGCCC TGCTGATCGA CTGTGGTCCC GACGTGCCCC GGACCGCTGC CCGGCTCGGA
GTACGCCTAT CGGGGCTGCG TCATCTGCTG ATCAGTCACG CCCATCCCGA TCATCTGGGG
CCCGAGAGCC TGATGTGGCG CTCGTGGTCG ACAGCCGCGG GACGGCCCCT CGACGTGGTC
GGTCCGCCGG CGGCGCTGGC GGCGTGCCGG GAGTTCCTGG CTCGCTGGGA GCGCTCCGAT
CCGGACCGGG ACGGCTCGCC GCTGCGGCTG ATCGCCGTGG TGCCCGGGGG CACGCCGACG
ACACCCGGAC CCCTGCGCCT CGGCGCGGAC GATCGGCAGG CCGCGGAGGA CCGGGGATCC
CCGGAGGATC AGGAGTCCCC GAGCGATCGG GGTTATCTCG TTCGACCGGT CGCCGCCCAG
CACGGTGACG CGAGCATCGG GCCGGCCGTG CTCTACGACG TGACGGCGCC GGACGGTGGA
CGTCTGCTGT ACGGCTGCGA CACCGCGGCG CCGCTGCCGG CGGAGACGCT CGAGGCGGTC
ACCGGCCGCG CCTACGACGT CGTGCTGCTG GAGGAGAACA ACGGCGACCG GCCGGGGTTC
GGCGAGCACC TTGACCTCGA CACCTTCGGT CAGCTCGTGG CCGAGCTGCG CCGCCGCGGC
GCCGTGGTGC CGAGCACCCT GGTACTGGCC GTCCATCTGA GTCACCGCAA CCCGCCCGGC
GACGAACTGG CCCGCCGGCT CCACCTCGTC GGCGCGCTGG CACCGGCGGA CGGGACCGTC
TATGACATCG TCCCGGCCGC CCGGCGGCAG CCATCACAGC CGTCGCAGCC GTCGCAGCCA
CCACGGGCAC CAGGGCGGTG GCAGAGTCCG GTGCTCCCGG CACCACACCG GGTCCTGATC
ACGGGGGGTG CTCGGTCGGG GAAGTCGGCC GAGGCCGAAC GCCGGCTGCT CGCCGAACCG
GAGGTGGTCT ACGTCGCGAC GTCGGCGCCG CCTGATCCGG CCGACGCCGA GTGGTCCGAG
CGGATCGCCG CACACCGGCG GCGGCGCCCG GCCGCCTGGA CGACCGTGGA GACGGTCGAC
CTGGTTCCCC TGTTGCGCTC TCCCGGACCA CCGCTGCTCA TCGACGGTCT GGGGCTGTGG
GTCGGCGCCT GGCTGGACCG TCCGGACGAG TTGCGCATCC GCGCGGAGGA GCTCGTTGAC
GCCTGGCGGG CCACCGGCCG TCGGGTCGTC GCGGTCACGG ACGAGGTCGG TTCCGGGGTC
GTTCCCCCGG CCGAGGCCGG CCGCCGGTTC CGCGACGTGC TCGGCCGTCT CAACGCCGAT
CTCGCGGCCG AGGCCGACGA GGTGTGGCAG GTGGTCGCGG GCATCCCCCT CCGGCTGCGA
CCGTTCCCGC ACGAGCGGTC ATAG
 
Protein sequence
MKVTLLGTGS ADGWPNPWCD CASCAWAREH EVRGQTAVLI DDALLIDCGP DVPRTAARLG 
VRLSGLRHLL ISHAHPDHLG PESLMWRSWS TAAGRPLDVV GPPAALAACR EFLARWERSD
PDRDGSPLRL IAVVPGGTPT TPGPLRLGAD DRQAAEDRGS PEDQESPSDR GYLVRPVAAQ
HGDASIGPAV LYDVTAPDGG RLLYGCDTAA PLPAETLEAV TGRAYDVVLL EENNGDRPGF
GEHLDLDTFG QLVAELRRRG AVVPSTLVLA VHLSHRNPPG DELARRLHLV GALAPADGTV
YDIVPAARRQ PSQPSQPSQP PRAPGRWQSP VLPAPHRVLI TGGARSGKSA EAERRLLAEP
EVVYVATSAP PDPADAEWSE RIAAHRRRRP AAWTTVETVD LVPLLRSPGP PLLIDGLGLW
VGAWLDRPDE LRIRAEELVD AWRATGRRVV AVTDEVGSGV VPPAEAGRRF RDVLGRLNAD
LAAEADEVWQ VVAGIPLRLR PFPHERS