Gene Francci3_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3126 
Symbol 
ID3903923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3697348 
End bp3697827 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID637880447 
Producthypothetical protein 
Protein accessionYP_482212 
Protein GI86741812 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.336493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.576485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGAGC ACAACAACCC GTCCACTCCG GCCGAAGCGC ATTACCTCGC CCCCGGATGG 
TTCACCCGTA ACGTGGCCAA CCGCGCCGTC GCGGCGTTGA CCCGGGCGGG GATCAGCCTC
CTGGGCAGTC GGATCCTCGA GGTACGCGGC CGGATCAGCG GCGAGCCGCG CCGGACCCCG
GTGAACCTGC TCATCTTCGA CGGGCAGCAG TACCTGGTCT CGGCGCGAGG GCACGGCCAG
TGGGTGCGTA ATCTGCGCGC GGCCCAAGGC GAGCTATGCC TGCTGCGTGG CCGGTCGCGC
ACGCGTTACT CCGCGACCGA GCTGGATCCG GCGGCGAGCG TCGCCGTGCT GCGGGCCTAC
CTGCGGCGGT GGAAGGCCGA GGTCGGCGCC TTCTTCGACG GGGTCGGGCC GGACTCGCCC
GATGAGGAGA TCCGTCGGAT CGCGCCCCGC CACCCCGTCT TCGTGATCAC ACCGGCGTGA
 
Protein sequence
MTEHNNPSTP AEAHYLAPGW FTRNVANRAV AALTRAGISL LGSRILEVRG RISGEPRRTP 
VNLLIFDGQQ YLVSARGHGQ WVRNLRAAQG ELCLLRGRSR TRYSATELDP AASVAVLRAY
LRRWKAEVGA FFDGVGPDSP DEEIRRIAPR HPVFVITPA