Gene Francci3_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3109 
Symbol 
ID3904235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3682530 
End bp3682985 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content75% 
IMG OID637880430 
Producthypothetical protein 
Protein accessionYP_482195 
Protein GI86741795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.669379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.329475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATG ACCAGCTACG TCCCGACCGC ATCCGCCCCG GCGCCGCCGT CCCGCCCGGC 
GTCCCCTCCG CGCAGGGCAC GGCCGCGCGG GCCGCGCTGC ACCGCCTCGC CGAGGGCAAG
GACGAGTGGG CCGCGCTCGG TGACCTCGCC GCCGCCGAGG TCCTGTTGCC CGACCTCGGT
AACGACATCA CCGATCTGTC GGAGGAGGAC GACAGCCTCC TGCAGCTGCC GGTGGCCGAA
CGGCAGGACG GCACCCAGTT CGTCCCGACG TTCACCTCTG AGCAACGCCT GGCCGAGGCG
CTGCCGGAGG TGGCGCGTTA CCGCACGGTC CAGGTGGCGG CCCTGGGCCG GATCTGGCCG
TCCGACGATC TTCTGCTCGC GGTCGATCCC GGCTCGGAGG GCGGCATCGC CCTGCCGGCG
GACGGCCTGC GGGCGCTCGC CGCGATGTCC GGCTGA
 
Protein sequence
MTDDQLRPDR IRPGAAVPPG VPSAQGTAAR AALHRLAEGK DEWAALGDLA AAEVLLPDLG 
NDITDLSEED DSLLQLPVAE RQDGTQFVPT FTSEQRLAEA LPEVARYRTV QVAALGRIWP
SDDLLLAVDP GSEGGIALPA DGLRALAAMS G