Gene Francci3_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3090 
Symbol 
ID3904216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3661526 
End bp3662392 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID637880411 
Producthypothetical protein 
Protein accessionYP_482176 
Protein GI86741776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC GGTCACCGGG TTCAGGACCC GGCGAGCACC GGCCCTCGCC GGCGGACGGC 
GCCGCGCCCG AGGGGGCTCC CCTCGGCGGG CCGGGCGGCG CCCCCGCCGG TGGCGGTGGC
ACCTCCGCGA ACCGCGAGGA GCCGACCGGC GGCGGATCCA CGCCCGGTGC CGCGCCCACG
GCCGGCCGGG GTGGCGGCGG TCTCGACGGC GACAGCGACG GATCCGCGAC AACCGCGGGG
GGCGACGCAC CGCGGCCCTC CCCGCGCTCC CAGAAAGCCG ACGACGCCGC GTTCTTCGAA
CTCATCGCGC GCTTCGACGA GGAGCCCGAA TCCCACCGGT GGCCGGCTGC GGAGGATCTG
GACGACACCC GCCGCCCCAC TGTGATCATC CTACGTCCGC CGTTCGAGCC GGCTGCTCCG
CCCGTGTCGG AGGACCGGAC CGAACCCGGG CTCGACCAGT TGCCGTTCCC GTCCGCGGGC
GGCGAGGGCG GCCGACGGGG ACGCGGCGGC ACCGAGGACC TCGTCGTCGA CCTCGGCGAT
CTGCCGGGTT CCGGCCAGCT CCCGGAGGGT CTGGACGACC CGGATCTGGA TCCGGATCCG
GATCTGGACC CGGACGGCGA GCACTACGAG CCGCCACCCC CGCCACCGCT GCCACGGATC
AGGCCCGTGA CACGCTGGGC GCTCGGTTCG ATCGCCCTCG GTGTGATGTT CCTCGTCGTT
CCGGACCTGA TCGACTTCAA CCAGTCCCGA ACCCAGAACG TCGCCGGGGT TCTGCTGATC
CTCGGCGGGG TCGGCACGCT GGTCGCGCGG ATGGGAGACC GTCCGCCCAC GGACTTCGAC
GGCCCCGACG ACGGCGCGGT GGTCTGA
 
Protein sequence
MTERSPGSGP GEHRPSPADG AAPEGAPLGG PGGAPAGGGG TSANREEPTG GGSTPGAAPT 
AGRGGGGLDG DSDGSATTAG GDAPRPSPRS QKADDAAFFE LIARFDEEPE SHRWPAAEDL
DDTRRPTVII LRPPFEPAAP PVSEDRTEPG LDQLPFPSAG GEGGRRGRGG TEDLVVDLGD
LPGSGQLPEG LDDPDLDPDP DLDPDGEHYE PPPPPPLPRI RPVTRWALGS IALGVMFLVV
PDLIDFNQSR TQNVAGVLLI LGGVGTLVAR MGDRPPTDFD GPDDGAVV