| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3078 |
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| Symbol | |
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| ID | 3904280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3647638 |
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| End bp | 3649353 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637880399 |
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| Product | hypothetical protein |
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| Protein accession | YP_482164 |
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| Protein GI | 86741764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCAG CGCGTGGTCG TGGCCGGTGG CCCGCCGGCC CGCGGCGGCC GACGTCGTGG
TGGCGGGAGT CGTCGTGGTG GCGGGAGTCG TCGTGGCGGG GCATGGCCGG CGGTGGACGG
CGGGCCGAGC GGGTCGCCGA CCTGCTGGAC GGACAGCGCC CCCCGTATGA CGAGACCGAC
GCGCGGCTGA TCGACACCGT GGCGGCCCTC CGGGACCTGC CGTCACCGCG GCTGCATCCG
GCACGGCACG CCGCCCTGCG CGGACAGCTG TTCGCCGCCG TCACCGGCTC CCCGGCATGC
GATCCCGTCC GTTCCCCCGC CGCCGTTTCC CCCGGCACCT CCGTGAAGGG CCACGAGACC
GAGGCCCGTC CCACAAGAAC CCGTCCCGCA CGCACGCCTC CCGAGGGCGT CGATCCTGAC
CTGCCGGGAA ACGATCCGGT CGACGCGCGG TGGGTACGCC GGACCGGTGC CCGCGGTGTC
TCTGCCTGCG GTGTCTCCGG CCGGGGCAGG ATGACCCGGG CCGCCCGGCC GCTGCTGGCC
GGAGCACTCA CCGCCGCCGT CACCACGGCG GCCCTCGCGG TCAGCTCGGG GGACTCGCTA
CCCGGCGATA CCCTGTACGG CGTCAAACGA CAGGTCGAAG ACCTCCAGGT GTCGCTGGTC
CGCGATCCGG TCGAGCGGGC GAAGACCCGG CTGGGCATGG CCGGCTTGCG GATGAGCGAA
CTGCGCACGA TCACGGTGAA CGACGGCGGG GTGATCGCCC CGGAAACCGG TGCCGGCGCT
CCGGAGACGA GCCCGCGGGT GCCGGTGGTG AACCCCACGG CGACCGCCGC ACCACCGACC
ATCGCGGTGT CACCGACCAT CGCGGTGTCA CCCGCTGCGG TGTCACCCAC TGCGGGGACG
TGGCCTCCCG GTCCCCGCAC ACCCGCCGTC TCCGGCGACG CCGGCGAATC CGATGGCCCC
GACGCGCCGA GCGACCCGCC CGGCCCCGGC AACGGGGACC GCCTCGACCC CGAGCTGGTC
AACGCGCTGC TGCGGGACTG GATCGCCGAG GTGCGCGCCG GCACGCAGGT ACTGCTGGCC
CGGGTCGCCG CCGGGGACAC GGACGCCTGG ACCACGGTGA ACGCCTTCAC CACCGAGCAG
TCCCGCGGGC TGAAGAACCT GCTGAGATCG CTTCCCGTGG GCTCGGTCGG ACCGGCGCAT
GCGGCTCTGG ATCTCATCGA CGACGTCAGG CGCAGGCTCG GCCCGCGGGC ACCAGCGCCG
GTCCGGGCCC CCTCACCCGT CCGCCAGATC TCTCCGATCG TGCCGACCGG TGACGCCCTC
ACCCCCCCGC CCTACGTGGC GCCGCTGCTC TCCGCACCTC GGCCCACGGC GACCGGGGCC
ACCGCCGCGC CCGCCCTCAG CACTCCCACC CCCGGCACTC CCACCCCTGC CGGCACCGGC
ATCGGCTCGC CGGGGCCCCC GAGCCCGGCG CCGGGTGGTG CCACGAGCGG AACGACCATC
CCGACCCCGA CCCCCGCCAC GACCCCGACC CCCGCCACGA CCCCGACCCC CGCCACGACC
CCGACCCCCG CCACGACCCC GACAGACGAC ACGACCCCGA CAGACGACAC GACCCCGACC
CCCGCCACGA CCGCATCCGA TGTCACGCCG ACCACGGTGG GCGCGCCCTC GCCGCAGAGC
CCCCCGAACG GGGCGCCGAC GCCGGGATCC CGCTAG
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| Protein sequence | MKAARGRGRW PAGPRRPTSW WRESSWWRES SWRGMAGGGR RAERVADLLD GQRPPYDETD
ARLIDTVAAL RDLPSPRLHP ARHAALRGQL FAAVTGSPAC DPVRSPAAVS PGTSVKGHET
EARPTRTRPA RTPPEGVDPD LPGNDPVDAR WVRRTGARGV SACGVSGRGR MTRAARPLLA
GALTAAVTTA ALAVSSGDSL PGDTLYGVKR QVEDLQVSLV RDPVERAKTR LGMAGLRMSE
LRTITVNDGG VIAPETGAGA PETSPRVPVV NPTATAAPPT IAVSPTIAVS PAAVSPTAGT
WPPGPRTPAV SGDAGESDGP DAPSDPPGPG NGDRLDPELV NALLRDWIAE VRAGTQVLLA
RVAAGDTDAW TTVNAFTTEQ SRGLKNLLRS LPVGSVGPAH AALDLIDDVR RRLGPRAPAP
VRAPSPVRQI SPIVPTGDAL TPPPYVAPLL SAPRPTATGA TAAPALSTPT PGTPTPAGTG
IGSPGPPSPA PGGATSGTTI PTPTPATTPT PATTPTPATT PTPATTPTDD TTPTDDTTPT
PATTASDVTP TTVGAPSPQS PPNGAPTPGS R
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