Gene Francci3_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3056 
Symbol 
ID3904257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3621910 
End bp3622314 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID637880377 
Producthypothetical protein 
Protein accessionYP_482142 
Protein GI86741742 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA CGACGCTGTC CGTGCGCACC GGCCGGCGAG AAAGTGTGGT GGACCTCACA 
CCCGATGCGC GGCGGTTCCT TGCCGGTTCC GGTGATGGGT TGCTGTCGGT CTTCGTGCCG
CATGCCACGG CCGGCGTGGC CATCTTCGAG TTGGGCTCCG GTAGTGATGC CGACCTGCTC
GCGGCGCTCG CGGATCTGCT CCCCGCCGAC GGCAGATGGC GCCACGCACA TGGAACGCTC
GGTCACGGCC GCTCGCATGT GATGCCGGCC ATCATCCCGC CCTCGTTGAC GGTCCCGGTG
ATCGACGGCC GCCTCGCGCT CGGGGTCTGG CAGTCCATTG CGCTGGTGGA CCTCAACGTG
GACAACCCCG ATCGAACGGT CCGGATGTCG TTCCTGGCGG GATGA
 
Protein sequence
MKTTTLSVRT GRRESVVDLT PDARRFLAGS GDGLLSVFVP HATAGVAIFE LGSGSDADLL 
AALADLLPAD GRWRHAHGTL GHGRSHVMPA IIPPSLTVPV IDGRLALGVW QSIALVDLNV
DNPDRTVRMS FLAG