| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3036 |
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| Symbol | |
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| ID | 3904389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3602593 |
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| End bp | 3603474 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880356 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_482122 |
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| Protein GI | 86741722 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.627986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAGTG ACGTGACTGT GAGGGTCGAG GGCGACGCTG CCGCGCCCGC CGTGTTGGAG
CGCATTCGGG CTTTGTCGGC GTCGTTGTCG TCGGCGGAGC AGCGGGTGGC GCGGCAGGTC
CTCGCGGACC CGGTTGCGAT GATCCACCAG TCGGTGAGCG AGCTGGCGCA GGTGTCGGGA
AGCTCGCCGG CGACGGTGGT GCGGTTCTGC CAGAGCCTGG GGCTTCGGGG CTACCAGGAA
CTCAAGCTGG CGCTGATCCG GGAGACGCTG CCGGTGGAGC GGCAGCTGGT GGACGAGGTG
TCCGCGGCCG ACGGCCCGGA TGAGATTGCC GGGAAGGTGC TCGGCGGGGC GGCGAGTGCG
CTGACCGAGG CGGCGCGGGG GATCGACGGT GGCGTGCTGG CGGCGATCGC CGACCTGGTC
GTCGCCGCGC CGCGGACGTT GTTCGTGGCG GTGGGGACGT CGGCGCCGCT GGCGATGGAT
GCCGCCTACC GGCTGACCAC GGTCGGGGTC GATGCGCGGT TCGCCGGGGA TGCGCATGTG
CAGCACGTCA CCGCCCGGAT GCTGGCGGCG GGTGATCTGT GCGTTGCGGT CAGCCACACC
GGCTCGACGG CGGAGACACT GGCGGCGATG CGGGCGGCCG TGGACGCCGG GGCGCATACC
GCCGCGATCA CGAGCTTTGC CCGGTCACCG TTGACCGAGC TGGTGCGGCA CGCGGTGGTG
GTGGGCAGTC GGGAGACGGC GTATCGCATC GAGGCGATGA CCAGCCGGAT CGTGCACCTG
TCGGTGCTCG ACGCCCTGTT CGCCCTCGTG GTGGTGCGCA GCCCGCGCAG CCCTGGCGCG
CTGGCGATGA CCGCCGACGT GATCGTCGAA CACCGGATGT AG
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| Protein sequence | MTSDVTVRVE GDAAAPAVLE RIRALSASLS SAEQRVARQV LADPVAMIHQ SVSELAQVSG
SSPATVVRFC QSLGLRGYQE LKLALIRETL PVERQLVDEV SAADGPDEIA GKVLGGAASA
LTEAARGIDG GVLAAIADLV VAAPRTLFVA VGTSAPLAMD AAYRLTTVGV DARFAGDAHV
QHVTARMLAA GDLCVAVSHT GSTAETLAAM RAAVDAGAHT AAITSFARSP LTELVRHAVV
VGSRETAYRI EAMTSRIVHL SVLDALFALV VVRSPRSPGA LAMTADVIVE HRM
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