Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3016 |
Symbol | |
ID | 3904369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3582171 |
End bp | 3583508 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880336 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_482102 |
Protein GI | 86741702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0445574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCC GAACCGCTGC CGAGTCAGTT CGCCCCGCGG CCGCCGGAAC CGGGACGCCG TCGGGCTCCG GTCCGGTCCG TCCGGACACG TCGAGCTGGC AGGCGTTCCC CGACTCTTCG GGGCACTTCG GGCGTTTCGG TGGTCGTTTC GTCCCCGAGG CCCTCATGGC GGCGCTGGAC GAGCTCACCG CAGCCTACGC GGCGGCCAGG GTGGATCCCG GCTTCACCGC GGAACTGGAC GGGCTGCTGG CGAGCTACGC GGGCCGGCCC ACTCCGCTCA CCGACGCCCA CCGGCTCACC GCGCACGTTG GCGGTGCCCG CATCCTGCTC AAGCGTGAGG ATCTTGCGCA CACCGGTTCC CACAAGATCA ATAATGTCCT CGGGCAGTGC CTGCTGACCC GGCGGATGGG CAAGACCCGG GTTATCGCCG AGACCGGAGC CGGTCAGCAC GGTGTTGCCA CGGCCACCGC CTGCGCCCTG CTCGGCCTGG ACTGCGTCGT CTACATGGGC GAGGAGGACA CCCGCCGGCA GGCCCTAAAC GTCGCCCGGA TGCGCCTGCT CGGCGCCGAG GTCGTTGCGG TCACCTCCGG CAGCCGAACC TTGAAGGACG CCATCAACGA GGCCATGCGC GACTGGGTGG CCACCGTTGA CACGACCCAT TACTGCATCG GGTCGGTGAT GGGCCCGCAT CCGTTCCCGA TGCTGGTCCG CGACTTCCAG CGGATCATCG GGGTCGAGGC GCGCGCCCAG GTGCTCGATC GTGTCGGCCG ACTGCCCGAC GCCGTCGTCG CCTGCGTCGG TGGCGGCTCG AACGCGATGG GCATCTTCCA CCCGTTCATC CCCGACGTCG AGGTCGCGCT GATCGGCTGC GAGGCCGGGG GGGACGGGGT CGCCACCGGT CGGCACGCCG CGGCGATCGC CGGCGGTTCC GCGGGCGTGC TGCACGGCAT GCGGACGTTC CTGCTGCAGG ACGAGTTCGG GCAGACCCAG GTCTCCCACT CGATCTCGGC GGGTCTGGAC TACCCTGGCA TCGGCCCCGA GCATGCCCTG CTGCACGAGA CCGGTCGGGC GAGCTATCGG GTCGTGGACG ACACCGCCGC GATGGAGGCG CTCGCGCTGG TGGCCCGTAC CGAGGGCATC CTGGTCGCGA TCGAGAGCGC GCACGCCTTC GCGGGTGCCC TCGACGTCGC CCGGAAGCTC GGTCCGGGCA CGACTGTCGT CGTCAACTGC TCCGGTCGGG GGGACAAGGA CGTCGACACC GCCGCCCGCT GGTTCGACCT CCTCGACGAG GCCGATGCCG GCGGGGGCCC CGTCGGCGGT CCGGCGCGAC CGGTCTGA
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Protein sequence | MTTRTAAESV RPAAAGTGTP SGSGPVRPDT SSWQAFPDSS GHFGRFGGRF VPEALMAALD ELTAAYAAAR VDPGFTAELD GLLASYAGRP TPLTDAHRLT AHVGGARILL KREDLAHTGS HKINNVLGQC LLTRRMGKTR VIAETGAGQH GVATATACAL LGLDCVVYMG EEDTRRQALN VARMRLLGAE VVAVTSGSRT LKDAINEAMR DWVATVDTTH YCIGSVMGPH PFPMLVRDFQ RIIGVEARAQ VLDRVGRLPD AVVACVGGGS NAMGIFHPFI PDVEVALIGC EAGGDGVATG RHAAAIAGGS AGVLHGMRTF LLQDEFGQTQ VSHSISAGLD YPGIGPEHAL LHETGRASYR VVDDTAAMEA LALVARTEGI LVAIESAHAF AGALDVARKL GPGTTVVVNC SGRGDKDVDT AARWFDLLDE ADAGGGPVGG PARPV
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