Gene Francci3_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2955 
Symbol 
ID3903770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3501321 
End bp3504002 
Gene Length2682 bp 
Protein Length893 aa 
Translation table11 
GC content74% 
IMG OID637880276 
Productbacteriophage resistance gene PglZ 
Protein accessionYP_482042 
Protein GI86741642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.418689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGG TAGCCGCGCC GGTCCTGGTC CGGGCGAAGG TGGCCGAGGT GCTCCGCCGA 
GACGAGAAGG CGCGCGTCGT CGCCCTGGCC GCGGCGCCGG TGTGGCCGCA CGACGAACGC
CTGGAACTGC CCGGTGGCCG CGGCGTGGTG GTCCGGCCAT GCGTGTCCAC CCTCGCGATC
CGCGACGAGC TGCAACAGGT CGACGATCTC CCTGCCGGGG AGGTACTCGT CCTGCTCACC
GAGTACGAAA CCGGCGAGCT GGGGACGAGC ATCACTGCCC GGCTCGCCGG TCAGAAGATC
CTGCCGCTTG ATCGCTGGCA GCAGCTCACC AGCCTGTTTC GGGCACACGG CATCGATCCG
GCCCTCGTCG ACGAGCAGTG GGCGGTGAAC GCGCTGCTCG CCACCCCCCC GCCGGACGGG
TATCCCGCCG CGCGCAACGG CTACCTGGAC CGGGCCACGG CATTGGCCAC ACTCGCCGAG
ACCCAGGCCG GGCTCACCCC GCTCGACCTC GACCTCGCGG GCCTGCTGCG ATGGAGCCTC
GACGCCGAAC ACCTCGCGCG GTGGCGCGCG TTGGACCCGG CGGTGCGTAC CGGCATGAGC
GGATGGCTTG CCGGCCGCGG CGGTCGAGGC GACGTGGTGG CCGCCGTTCT CCGGTGCTTC
GCCGGGCCCT ACGGTCCCGA CGCCGTCGCC GTCGGACTGG TGCTCGCGGC TCTCAGCCAT
CCCGAGGTCC GGGACACGGC GCAGGTGCCG CGCACCATGC TGGAGACGCG GGTGGTCGAC
GGCGCTCTCG CCCCGTCCGT CGCCGCGGAA TGGGGACGCG CGGCTGAAGG GCTGGTTCAG
CGGCTGCTCG GCCAGGAGGG GCGGGCCGTG GCTGGCGGAA TCCTGCGACG CGCCGAGGAG
ATCCTGGCCG GGCAGGGCGC CGCCGAGCTG TCTTATCCCA GCGCCGTCCT CGAATCCGGT
CTCACCCAGC GCCTGCGGCA CATTGGCTCG CAGGTCGCCG CGGTGCTGCG CAAGCGGCGG
CTACGCGCCG AGGATCTGGG GCCGGTCGAA CATGAGGTGG CGCGGCTGAA CGCGCACGCG
CTGGCCGCCG ACCATGCCGA GCGGGTGAGT CGCGCCGAGA TGGCCGTTCG GCTGCTGCGC
TGGCTGGCCC AGGAGGCCGC GTCCGCCCGA CCACCGGCGC CGAGCCTTGC CGAGGCGTCC
CGTCGGCAGC AGGACCAGGA CGCATGGGTC GACCTGGCCC GGGCGCGGGT GTGGGAGGGC
GACGTCGATC AGGTGGTCGC CGCAGCCTAC CGGACACTGT GCACGACGGT CGACGCCCGT
CGCCGCGAAC ACGAACGGCG GTTCGCGAAT CTGCTCGCCG ACCACACCCG CACCGGGTCG
ACGCTGGGCG AGCTGCTGCC GGTGGAGGAC GTGCTCGACC AGATCGTGGT GCCGCTGGCC
GGCCGATGCC GGCTGCTGCT GCTCGTACTG GACGGGATGT CCACCGGGGT GGCGCGGGAG
CTGCTCGCCG ACCTGTCGAC CCGGGGCTGG GTAGAACACA CCCTCACCCC GGCCCGACCG
GTGCTGGCCA CCCTGCCGTC GGTCACCCGG ACCTCGCGGA CGAGCCTGCT GTGCGGGCGG
CTCGTGGACG GCACGCAAAG CCAGGAGAAG GCATCCTTCG CCGAGCGGGG CTGGCCGCTG
TTCCACAAGG GCGACCTCGC CGCGGCCGGT GCCGGCGAGG TGCTTGAGCC GCGCGTCGCG
GACGCGATCA GGGGCGACGC CCCCGTGGTC GGCATCGTTG TGAACACCGT CGACGACACC
CTGGACAAGG GTGGGCGCAC CCCCTGGACC GCCAGCTCGG TCGATCGGCT GCTCGACCTG
CTGGCCACCG CGGACGGATC GGGCCGGGCC GTCCTGCTGG TCAGCGACCA CGGCCACGTC
CATGAACGCG GCTCCCGGCT GGTTTCCGAC GACAGCGGCG GCGCGCGGTG GCGATCATCG
GCGCGCCCGC CCGACGAGGA CGAGGTCACG CTCATCGGCC CGCGGGTGCT GCTGGGCGGC
GGCCGGATCG TCGCCGCCTG GAACGAACGG CTACGTTATA CGGCCCTGCG CAACGGCTAC
CACGGCGGCG CCAGTGCCCA GGAGATCGTG ATCCCGTTGG CGCTGCTGCG TCGGGTCGAC
CTCGACCTGC CCGGTTGGAC TCCCTTGCAC CATGCCGCGC CTCCCTGGTG GGTGGAGCCG
ATGGCCACGG GCACCACGCC GGCCACAGGC ACCACGCCGG CCACGGGCAC CACGCCGGCC
ACGGGCACCA CGCCGGCCAC GGGCACCACG CCGGCCGGAC ATGCCGGCTC GGCCGCACAG
CCGGACCTCG GTCTGTTCGA CGAGTCCGAG GTGACGCCGC AACCGTGGGT GGATCGCGTG
CTCGATACCG AGGTGATGCG GGCTCGGCTC GCCCGGATGC GTCGCGGGGC CATGCCCGCG
GACCGGCTCG GGGTGCTCCT GCGGGCGCTC GACGCCCGTG GCGGCGCCGC CACGCGGGCC
ACGGTCGCCC GCGCGCTCGA CGTGCCGGAC GCGCGGATCG CCAGCCACCT CGCCGCGGCG
CAGCGGGTGC TGAACATCGA CGGCTACGAG GTGCTGCGGA TCGATGGTGA CACCGTGCGG
CTGAACGCCG CGTTGCTGGC GACGCAGGCC GGTCTGACGT GA
 
Protein sequence
MTVVAAPVLV RAKVAEVLRR DEKARVVALA AAPVWPHDER LELPGGRGVV VRPCVSTLAI 
RDELQQVDDL PAGEVLVLLT EYETGELGTS ITARLAGQKI LPLDRWQQLT SLFRAHGIDP
ALVDEQWAVN ALLATPPPDG YPAARNGYLD RATALATLAE TQAGLTPLDL DLAGLLRWSL
DAEHLARWRA LDPAVRTGMS GWLAGRGGRG DVVAAVLRCF AGPYGPDAVA VGLVLAALSH
PEVRDTAQVP RTMLETRVVD GALAPSVAAE WGRAAEGLVQ RLLGQEGRAV AGGILRRAEE
ILAGQGAAEL SYPSAVLESG LTQRLRHIGS QVAAVLRKRR LRAEDLGPVE HEVARLNAHA
LAADHAERVS RAEMAVRLLR WLAQEAASAR PPAPSLAEAS RRQQDQDAWV DLARARVWEG
DVDQVVAAAY RTLCTTVDAR RREHERRFAN LLADHTRTGS TLGELLPVED VLDQIVVPLA
GRCRLLLLVL DGMSTGVARE LLADLSTRGW VEHTLTPARP VLATLPSVTR TSRTSLLCGR
LVDGTQSQEK ASFAERGWPL FHKGDLAAAG AGEVLEPRVA DAIRGDAPVV GIVVNTVDDT
LDKGGRTPWT ASSVDRLLDL LATADGSGRA VLLVSDHGHV HERGSRLVSD DSGGARWRSS
ARPPDEDEVT LIGPRVLLGG GRIVAAWNER LRYTALRNGY HGGASAQEIV IPLALLRRVD
LDLPGWTPLH HAAPPWWVEP MATGTTPATG TTPATGTTPA TGTTPATGTT PAGHAGSAAQ
PDLGLFDESE VTPQPWVDRV LDTEVMRARL ARMRRGAMPA DRLGVLLRAL DARGGAATRA
TVARALDVPD ARIASHLAAA QRVLNIDGYE VLRIDGDTVR LNAALLATQA GLT